Gene Sterm_0254 details

Gene Information

• Locus tag: Sterm_0254
• ID: 8595750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 278232
• End bp: 280283
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 35%
• Product: surface antigen (D15)
• Protein accession: YP_003307070
• Protein GI: 269118893

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0103892
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGAA AGTTATCATC AATTATAATT GTGATGGTTA TACTTATTTT GGCAACATTT 
AATATTCAAG CCGCAGAAAA TAACGAACTG AGGGTTAGAA ATATTCTCAT CTCTAACTTA 
AGGGAACTGC CAAGAGAATT AGTAATGAGC AAATTAAAAA TAAGAGAAGG AGAAACATAC 
AGTACAAAGA AAATAAGTGA TACTTATCTG GCTCTTAGGG AATTACCCTA CATCAATGAT 
GCTAACTTTT ACACACAGGT AGAAGGCGAC AATATAGATA TCAGAATAGA AGTAGATGAA 
ATGCCTAATG CGCTGGAAAT AGCGAAAAGG GAAGAATCAA GAGAAGAGCT TAGTAAAAAA 
ACTGAATTTA TAATATCAAA TGTAAGTATA ACAGGATTAC AGTCTCTGAA AGAAGCTGAT 
TTCATAAAAG ACATTCCTCT TAAAACAGGA GAGTTTTTTG TGCCGCAGGA TGCCATAGAC 
GGAGCTTCAA AATTATTTAA TTCAGGATAC TTCAGTAGTG TAGAGCCTAA GGTAGTTAGA 
GGAGCAGATA ATACTATCAG CATAGAATAC GTTGTTGAGG AAAATCCTAG AGTAAATAAT 
ATTACAATAG AGGGAAATAC AATATTTACT GAAGCAGAAT TATTAAGTGC CCTTGAGGTA 
AAAAAGGGAG ATATTCTAAA TATAGAGAAA ATGGATCCTT CTAAAAACGG TGTAATCAAA 
AAGTATCAGG ACAGCGGTTA TACTCTGGCA AGAATTGATG ATATGAAGCT TGATGACAGC 
GGAAATGTAA GAATAATCCT TTCTGAAGGT ACAATTGAAG CAATAGAATA CAGAAAGATA 
GGTAAGAAAA GAGAAGGTGA AAGAAGAACA CCAAAAAGTA CAGATTTAAG AACTCAGGAT 
TATATCCTTG AAAGAGAAAC AAGAATGAAA GTAGGGGAAA TTTTTCAGAG GGATAAAATG 
GAACAGACAA TAAGAAATAT ATACAGAACA GGACTTTTTA CATCAATACA GCCTAACTTT 
AAACCAAGTG CTACAGATCC TAACGGAAGA ATAATAGAGA TGGAGGCTGA AGAAAGACCG 
GCAGCATCTA TTAACGGTAA TATATCATAC GGAACTTCAG TAGGATTCTT AGGAGGTATT 
AACTATACAG ATTCCAATTT CCTCGGAAGA GCACAGGAAT TCAAAGCAGC TATTGAAATT 
TCAGATGAAG GTGACCAAAC ATATGAAATA AGTATTTTTG ATCCTTGGAT AAGAGGAACG 
GAAAGACTTC AGGCAGGAGC AAGTATTTAT TACAGACAGA CAGAAGATGA CGATGCTAAC 
GGAACAGATT TATATAAAGT AAAAAGATAC GGTACAAGAT GGACACTTGG ACAGGGACTT 
AACGACGACA TATACGTAAG AGGGGCAATC AGATACGAAG ATGTTAAGGA ATATTACAGA 
AGTGGTGCTA AAAGAGATGA CTATGACTTA GTAGCTTTTA CTCCGACAAT TACATATGAC 
ACAAGAAATA ACAGATTTAG TCCTCAAAAA GGTTTATACT TAAGTTTAAG TGATGAAATA 
GGTAAAATAG TATCAGATCA CAGAAGCTAT AATCAGTTTG AAATTGATTT GAGAGCATAT 
CACAGAACAT TCTTTAAAGA TAAGAATACA ATGGCATATA GAGCAGTTTG GGGAACAACA 
GGATCAGAAA CACCGGAAGC ACTAAGGTTC AAGATGGGTG GAGCAGACTC TATAAGAGGA 
TATGATTATG GTGACTTTGA AGGATATAAC GAATTTTACT TTAACGTGGA AAACAGAACA 
CAGGTAACTA ACAGTATACA GGTAGTAGCT TTCTTCGATA TAGGTAATGC TTGGCAGACT 
AATGATAAAA AACCTGACAG AGACGGAGCA GATAAATTTA AAGATCTGAA ATCCGGAGCA 
GGAATAGGAG TAAGAATATT AACACCTGTA GGACCGCTAA AATTTGACTA TGCATGGCCG 
CTTGATATAG CACCTGGAGA TTCCAAAAAA GATAATGGTA AATTCTACTT TAACTTTGGG 
CCAAGCTGGT AA 

 

Protein sequence

MKGKLSSIII VMVILILATF NIQAAENNEL RVRNILISNL RELPRELVMS KLKIREGETY 
STKKISDTYL ALRELPYIND ANFYTQVEGD NIDIRIEVDE MPNALEIAKR EESREELSKK 
TEFIISNVSI TGLQSLKEAD FIKDIPLKTG EFFVPQDAID GASKLFNSGY FSSVEPKVVR 
GADNTISIEY VVEENPRVNN ITIEGNTIFT EAELLSALEV KKGDILNIEK MDPSKNGVIK 
KYQDSGYTLA RIDDMKLDDS GNVRIILSEG TIEAIEYRKI GKKREGERRT PKSTDLRTQD 
YILERETRMK VGEIFQRDKM EQTIRNIYRT GLFTSIQPNF KPSATDPNGR IIEMEAEERP 
AASINGNISY GTSVGFLGGI NYTDSNFLGR AQEFKAAIEI SDEGDQTYEI SIFDPWIRGT 
ERLQAGASIY YRQTEDDDAN GTDLYKVKRY GTRWTLGQGL NDDIYVRGAI RYEDVKEYYR 
SGAKRDDYDL VAFTPTITYD TRNNRFSPQK GLYLSLSDEI GKIVSDHRSY NQFEIDLRAY 
HRTFFKDKNT MAYRAVWGTT GSETPEALRF KMGGADSIRG YDYGDFEGYN EFYFNVENRT 
QVTNSIQVVA FFDIGNAWQT NDKKPDRDGA DKFKDLKSGA GIGVRILTPV GPLKFDYAWP 
LDIAPGDSKK DNGKFYFNFG PSW