Gene Sterm_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0238 
Symbol 
ID8595734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp260842 
End bp261948 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content32% 
IMG OID 
Producttype II and III secretion system protein 
Protein accessionYP_003307054 
Protein GI269118877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAA AATATATTTT TCTTATTCTG TTGATATTTC TGCCTGCATA CAGTACAGAA 
ATCAGTAATT ACGTAAATAA AGAAGATCAT GAAGCTTCAA AGAGAATTTT TATTGTTAAG
CCTAAGGAAG AAATAAAAAA AGCTTCTGAA AAAGTACAAA ATACTGCAGA AATAAAAAGT
GAAATTTCTT CTCCTGCTTC TCTGCAAAAT AACAGTGAGA AAAATAAAAC TCCGCCTGTT
ACCCGGGAAA GCATAAGACT TGTTAATATC GATACCTCTG AGCTGATCCC GAAGCTCAAG
GATATTAACA CCTCTAAAAT AACCGGGCTT GGAAAAGAAC TTATTCTGAA AGGAACTATG
GAAGAGATCA ATGAACTAAA ATATATTATA GAAAAATTTG ACCGTCCTAA AAAGCAAATT
CAAATAAAAG CTACTATTAT TGATACAAGT GACAATCTTT TTGAAAGACT GGGCGTTGAT
TTTTCTGCCG GAAAAAACAA TGATAATAAA GCTTCGGATT TCCTCAGTTC GTTTATAGAC
GGTAATCTTT CATTGTCCGG TTTATTGAAA ACAGGAGGAA ATTTTTTAGG TATCAATATA
GACGCTCTTA AAGAAAATGG AGATATAAAA ATAGAAGCTA TGCCTGTCCT TCTCATTCTT
GAAGGCAGTG AGGGAGAACT CAGAGTCACT GAGGAGGTAA TTGTCGGCGA AAAAAAATCT
ACTATTAAGG ATACAGAGTA TATAGAGCCT GTTTTTGCAG AGGCCGGTGT TGTTTTTAAG
ATAAAACCTG AAATAAGAGG TTTCGGCGAT TCTCAGGAAA TCATACTTTA CATTGATTCC
GAAATAAGTA ATTTTAAGCT AAGCTCTAAT TTTAATGCCG ATCAGGGTGC AAAACAGAAA
AATAAAATCA ATTCAATAGT TTCTTTCAAA AACGGAACTT CTGTTTTTAT AGGCGGTTTA
AAACAAAATG TACAGAAAGA TTCTGAAAAA AGAGTCCCTG TATTAAGCAA AATACCAATT
CTGGGTTCTT TATTCAGATA TAAGAGAAAA AATAAAGAAA TCCGAGATAT TTATATTGAA
ATAGAAGGAG AAATACAGAC AGAATAA
 
Protein sequence
MNKKYIFLIL LIFLPAYSTE ISNYVNKEDH EASKRIFIVK PKEEIKKASE KVQNTAEIKS 
EISSPASLQN NSEKNKTPPV TRESIRLVNI DTSELIPKLK DINTSKITGL GKELILKGTM
EEINELKYII EKFDRPKKQI QIKATIIDTS DNLFERLGVD FSAGKNNDNK ASDFLSSFID
GNLSLSGLLK TGGNFLGINI DALKENGDIK IEAMPVLLIL EGSEGELRVT EEVIVGEKKS
TIKDTEYIEP VFAEAGVVFK IKPEIRGFGD SQEIILYIDS EISNFKLSSN FNADQGAKQK
NKINSIVSFK NGTSVFIGGL KQNVQKDSEK RVPVLSKIPI LGSLFRYKRK NKEIRDIYIE
IEGEIQTE