Gene Smon_1408 details

Gene Information

• Locus tag: Smon_1408
• ID: 8601154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: -
• Start bp: 1545122
• End bp: 1551358
• Gene Length: 6237 bp
• Protein Length: 2078 aa
• Translation table: 11
• GC content: 30%
• Product: YadA domain protein
• Protein accession: YP_003306724
• Protein GI: 269124147

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGAAATAAA AAAGTTTTTA AAAAGTTCTT TGAAAAATAA GGTAAGTATA 
AATGAAAAAA TGGTGTTAAG GTATCTACTT ATAGGAATTG CAGGATTATC AGCAATGTCA 
TATGGAGCAT ATTTAGCAAT AGATGATACT AAAGGAACTG TTGGAGCTGC AAAAGATCCT 
AATGGAGAGT ATAACGATAA AAGTAATGTA ATATTAGCTA AATATGAGAG TAAGAATAAT 
ACTTCTAGTT CAGTAGTAAT AGGAGCTGGA GGGAAAACAT ATGCAAAAGG TTCTGAAAAT 
GTAGTAATAG GATTTAATGC AAAATCAGAT AAACAACAAA GTGTTGTAAT AGGAGCTAAT 
ACTAAAACAG ATTTACAAAA TTCCGTAATT CTTGGAAATA ATTCTTATGT TTACAAAGAT 
CACTTTAATA TAGGTAATGG TGTAGAAGAA AATGATGGTC AAGGAGTTGC TGTAGGTAAC 
TCTGTTTTTG CGACTGGACA AGCAACTTCT ATAGGAAATA ATACATATGC CATAGGAAGA 
TCATCTATAG CTATAGGTAA TGATGATATA TCTGCATATG AAACTAAGGT TACTCAACAT 
GATTATGATA GTTATTTCAA AAAACTTTAT GAAAAGATAG ATAATAAAGG TGATTTGTAT 
GGTTACGGAA CTAAAACAAA TGCCGATAAG CATAAATATT CACCAACATT AGCACAAGGA 
CATGGATCAA TTGCAATAGG TTCTCGTTCT ATAGCTTATG CAAATGGATC TACAGCACTT 
GGTACTCTTG CCTATGCTCT TAAAGATGGA TCAACAGCTG TTGGTACACT AACAAGGGCA 
GAAGGAGAAG GGGCAATAGC ATTAGGAAGA GAAACTAATG TATTTGCTAA TAATGCGATA 
GCATCAGGTA ATAAAACTCT GGTATTAGAA GAAGGTGGAG CAGCTTATGG ACTATCAGCT 
ATTTCAGGAG GTAAAAATTC TATAGCTATA GGAACTGATG TTTATGCCAA TGTTGAGTAT 
GATTATGATA GTAAGATAAA ATTAAAGAAT AGTAGTACGA GTGTTAATGG TAAAGAAACT 
ATAACTAGTT TATTTGGTAA TATAGCTGAC TATAGTTCTG AAGATAGTAA AGAGGAAATG 
AGAGGTTTAT ACGGCTTTGA TTTAAATGGA GTTGCTAAAA CTTTAATAGG TCTTGGAGAA 
GCAGATGCAC CAGATAAAAT AACAGGGGCT AAAAAAGGAG AATATTTAAA AAGTGGAGAA 
TACTTTTTAA ATTATAAAAA CTATATCGAA GGTATAGAAA ATGGATTAAC AAATGCATAT 
GATAAAGATA ATGATACTAA TAAAACTAAT TCAATAAAAA TTAAAACACA AACAAAAAAT 
GGAGTAGAAA ATATAGCTAA ATCTAGTGGT AAGAATGCCA TAGTTATAGG AAGTAAATCA 
GGAGCTTTTG GAGATAATGG TATAGCTTTA GGTAGAGGAT CATTCTCACT AAAGGATAAT 
TCAATATCAA TAGGTTCTTA TTCTTATACA AAAGAAAAAA ACTCAATAGC ATTAGGAATA 
GCTTCAAGAG CATTAGCAGA GGGTTCTGTT ACATTTGGTA ATGGAGCTGG AGTAGATGTA 
AATGGTAAAA ACTCTATGGT TTATGGTCAT GGTTCAGTTG CATATGCTCC TAATTCAATA 
ATACTTGGGA TAAATTCACG TGTTTGGGGA ACTAAAAATG ATGGAGATTC TATTATCATA 
GGAAATGATG CCAATGTAAG TGAATTAAAA GAAAATAGTA CAGTTGTAGA AGGACATAAT 
GGTAAATCAG TACTAGCTTT AGGTAATAAG ACTAATGCAA CACTAGATAA CTCAGTTGCC 
TTAGGATATC TTTCAGCCAC TGATTATCAT AAATCTGATT TAGATAAACC AGGCTATACA 
GCTAAAGGAT CATACTCTAT ACCAACCTCA TCAAAAGTAG GGGTAATATC TGTAGGTAAA 
AAAGGACATG AAAGAAGAAT AATTAATGTT GCATCAGGGT ATAGAGATTC TGATGCTGTT 
AATGTTGCCC AACTTAAAAC ATTAGAAGAT AGATTAGATG GAGCAACAGA GGAAGTAGAT 
GATAAGGTTA GATATTTATC TATAAATAAT GGAAATGATT TAGATAAAAT AGTTAGAAAA 
AGAATAGATT ACAAAAACTA TGTAAAATTA AAAGCACAAA TGCTAACTAT AGAAGCTAGA 
AAAGAAAATG GTGAAACAAT AAATGATGCC AATGTTAAAG GATTAAAAGA TAAGTTAGAT 
GAATTAGAAA AGAATGAAGA AATAAAAGAT AAGGCTACTT CGCTTAATGC TCTAAATAAG 
AATGATCAAA AATATAAAAA TAATGGTAAC TTTAATATAG ACAAATATAT GGAAGATTTA 
GAAAAAGCTA AACAAGAAGA TTCATCTGAA ACTAAAGTAG ATAATATATT AACAGATGAT 
GAAAAGAAGA GAATAGAAGA AGAAAATTAT TCTAATAAAG GTGCAAAAGC TAAAAATTCA 
ATAGCTATAG GTCATAAAGC TAAAGTAGAA GCAAACGCAG AAAATGCTAT AGCCATAGGA 
ATTGGAGCAG TTGCTACTAA AAAAGATAGC ATAGTGTTAG GAAGTGAATC TAAGGAAACT 
GCAAATACAG ATAATTCAGG ATATGATATT ACAACACAAA AAAGTTCTAC TTTAATGGAT 
GCAAAATGGA AACCAACTCA TGGAGAACTT GCTATAGGAG ATGGAGTTAA TAAAACTAGA 
AGAATAACAG GAGTTGCAGC AGGATATGAA GACACTGATG TTGTAAATGT GGCACAACTT 
AAACAAGTTT CATCAGGGTT ATTAAAAGAT AAAGATCTAA TATTTGCAGG TAATGATAGT 
AAAGAAGTAA AAGTTGGATT AGGGGAAAAA CTTAATATCA TAGGTGAGGG TTCATTTAAT 
GAAGGAACAG CTAAGGATAA TATAAAGATA ATTAAGACAG CTGATGATAC ATTAACTATA 
GGACTTGCAG AAGATTTAAA GGATATAAAT AAGATAACAA CTAAAACTAA TACAAATGGT 
CAAAAATCAA TTTTATCAAC AGAAGGACTT AAAGTTACTG GAAAAGATAG TAAAGAAACA 
TCAGTTACAT CTGAAAATAT AGAAGTAAAA AATAGTGCAG ATAAGACAAT ATTATCAGCA 
AGTGGATTAA AAATCACAGA TAAAGATGGA AAAGATACTG ATAAAAGCAA TATATTAACT 
AAAACTTCTA TAACATTAAA AGATAAGAGT AATAATAAAG AAGTTACGAA CACTATAACA 
GCAGATAAAA GTGAAATAAC TAATAATACT GGAGATAAAA CAACTATTAC AGCAGATAAA 
ATAACTGTAG CAAATGGAAC TGATAAGGTA GAAATTACTA AAAATTCTTT ACTAGGTGCA 
ACTACTATTG GTAAAGATGC TGATAATAGC CTAATATTTG GAAGTGGAAC AACAGATAAT 
ACTACTACAA AATTAAAGGT CGGTGGAAAA GAATTAACAT TCACTAAAGC AGGAGAACAT 
ATAAAGATAT CAAATGTAGC AAATGGAAAA GATGATAACG ATGCTGTAAA TGTATCACAA 
CTTAAAGAAT ATGTAAAAGT TTTAGGAGGA AATGCTAAGT TTGAAAATGG AAATCTTACA 
GCTCCAACAT ACATGTTAAA AGCAGGAGAA GCAGCACCTA AAAGTTATAA TACGGTAGGA 
GACGCTTTAA ATGCATTAGA TAATGCTATA GGAACATCAA CAAAAAATAT AGCAGATCTT 
ACTAATAAGC AGATATCGTT CCAAGGAAAT GATGGAGATG CAAATAAAGT AAGTAAAAAA 
CTGGGAGAAA CTTTAAAGAT ACAAGGTGAA GGAACAGTTA ATGGGGCTAC AGCCAAAGAT 
AATATTAAAG TTACAAAGAA TGCTACTGAT GATGGATTAG ATATTAAACT TGCTGAAAAT 
TTAAAGAACC TAAATAGTAT AGAAACAAAA GACAATAATG GAAATAAAAC AAAAGTTGAT 
ACTAATGGTG TTGAGGTTAC AAGTAATGAT AATAAAGCTA ATCTAACAGC AGATAAGTTA 
ACATTCGGAC CAAAAGAAAC TACTTCAGCA GATAAAACAA GTACAGAAGT TGGAAAAGAA 
GGAATAACTT TAAAAGGTAA AGATGGAAAT GAATCTGTGT CTATAAAAAC TGAAAATAAT 
GCAGGAACAA TAACTGTAAA AGACAAAGAT GGAAAAGATA CTATAAAAAT AAATGGTGAA 
AAAGGTTCTA TCACTGGTCT TAAAGACATA TCTCCTAACG AAAAAGATGG AAGCATAGCA 
GTTAATAAAA ATTATGTTGA TAGTCAAATA AAAGCAATAG CTAATGGACC ATTTGAGTAT 
GAAACATCAG ATGGTGAAAA AGTTGTAAGA GGACAAGATA ATAAATTGTA TAAGGAATCT 
GAATTAAAGG ATTACTACTA TGATGAAGCT ACATCTAAAT ACAAACATAA AACTAATGGT 
ATGAATAATC AAGAACCAAA AGCATTAGAA AATAAAGATG TAACAGTAAA TGTAATGCCT 
AAGAATGGAA CACCAATATC AATAGGAAAT GTAGCAAGTA TTCTAGGAGA AGAAGCAACT 
AAAACATCAG ATAAAGCTGC TGAAAAAGTT AAAGAACTAA TTGGAAATTC TGATAATAGC 
AAAAACAAAG TAGCAACAGG AACAGATGTA TTAGCATTAG CTATGGCTGG AATAAATTTT 
TCAGGTAATG AAGGTTCAGG AGAAAAAATC CATAGAAACA TAGGAGAACA AGTAACTATT 
AAAGGTGAAG GAACAGATAG TAAAGATGAC TTTACTAGTG CAAGTGGAAA CATACAAGTT 
AAATCAGATA AAGATAAAGG AGAATTAACA GTAAAACTAT CAGATAAGCT AACTAACATG 
ACTTCATTTG AAACAAAAGA ATTAGATGAT AATGGAAATA AATCTAAAGT TAAACTAGAT 
AAAGAAGGAC TAACTACAAT TAATAAGACA GATGATAATA AATACATAAT GTCTAAAACA 
GGACCAAATG GAACTGAAAT AGGTAAATAT GATGTGAATC CATTAGAAAA GAGTAATAAT 
AATGCTCAAC CAACTACAAG TGCCAAATAT ACATTAGAAG GAACAACAAT AAAAGATGAT 
AAAGGAAGTT CTAACCTAAC ATCAAATACA TTAACTTTAA AAGATAAAGA TGATAAACAA 
AGAATAACAT TAGATAATAA AGGTGATACT CCAACTATTT CTTTATCAAA TAAAGAAGGA 
GAAGAAACAG TTAAAATAGA TGGAGGAAAT GGAAAAGATA AAGAATCATC AATATCATTT 
AAGGTAGATA ATGATAAAGG ATTAGGAGTA GTAAAAGGTT TAAGAGATCT AACAGATAAT 
GATCCAGGAC ATTATGCAGT AAATAAGAGA TATGTAGATA ATAAATTAAA TGGAGCTTTA 
GGAGGGGTAG CAAATGCAAT AGCAGTAGCA AGTATACCAC AGATAAATGG AAAGGGACAT 
AATATAGGAG CATCATATGG ATATTATGAA GGACATTCAG CCTTTGCATT AGGGTTAAGT 
GGAATAAATG AAAGAGGAAA TGTATTATAT AAGGCAAACT TATCATTAAA TACAAGAGGA 
AATGTAGGTA TAGGAGCAGG GATAGGATAT CAGTTTGGAG GAGATGATGT AAGAAGAGAA 
GAAGTAATAA TAGAAAATAA TCCTTCAAAT GATATAAGAG ATAGATTGAT TGAACAAAAT 
GAAAAGTTAA TTAATCAGAA TAAGAAGTTA GAAGAAGATA ATGATAGATT AAGAAGAGAA 
AATGATAGGA TAGGAGATGA GATAAAGGAA TTAAGAGAAA GAATAAAAGC AATAGAAAAA 
ATTAAGATGA ATGAAGATGA CTTATACACA CTAGATGGAT ATAGATTAGG TATACATGAG 
CTAACAAGTA GCCAAGAAGA GATGTTAATG AATATAGTAA GAGAGTTAAA TGAGAACTAT 
AAGAATAGGA AGATATATAT AACAGGGTAT ACAGATAATG TATCAGGAGA GGATTTAAAT 
CTTGAGTTAG GTTTAAAGAG AGCAAATGTA GTAGCAAAGA AACTAAGAGA GTTAGGCTTA 
GATATGAGTA TATCAATAAG GAAGGTAAGT TCATCAGGAT ATAATAACAT AGTAGAAACA 
AATAAGAGTT CAAGTGGAAG GTCTTCTAAT AGAAGGGTGG AGATTGAATT AAGATAG 

 

Protein sequence

MKKIEIKKFL KSSLKNKVSI NEKMVLRYLL IGIAGLSAMS YGAYLAIDDT KGTVGAAKDP 
NGEYNDKSNV ILAKYESKNN TSSSVVIGAG GKTYAKGSEN VVIGFNAKSD KQQSVVIGAN 
TKTDLQNSVI LGNNSYVYKD HFNIGNGVEE NDGQGVAVGN SVFATGQATS IGNNTYAIGR 
SSIAIGNDDI SAYETKVTQH DYDSYFKKLY EKIDNKGDLY GYGTKTNADK HKYSPTLAQG 
HGSIAIGSRS IAYANGSTAL GTLAYALKDG STAVGTLTRA EGEGAIALGR ETNVFANNAI 
ASGNKTLVLE EGGAAYGLSA ISGGKNSIAI GTDVYANVEY DYDSKIKLKN SSTSVNGKET 
ITSLFGNIAD YSSEDSKEEM RGLYGFDLNG VAKTLIGLGE ADAPDKITGA KKGEYLKSGE 
YFLNYKNYIE GIENGLTNAY DKDNDTNKTN SIKIKTQTKN GVENIAKSSG KNAIVIGSKS 
GAFGDNGIAL GRGSFSLKDN SISIGSYSYT KEKNSIALGI ASRALAEGSV TFGNGAGVDV 
NGKNSMVYGH GSVAYAPNSI ILGINSRVWG TKNDGDSIII GNDANVSELK ENSTVVEGHN 
GKSVLALGNK TNATLDNSVA LGYLSATDYH KSDLDKPGYT AKGSYSIPTS SKVGVISVGK 
KGHERRIINV ASGYRDSDAV NVAQLKTLED RLDGATEEVD DKVRYLSINN GNDLDKIVRK 
RIDYKNYVKL KAQMLTIEAR KENGETINDA NVKGLKDKLD ELEKNEEIKD KATSLNALNK 
NDQKYKNNGN FNIDKYMEDL EKAKQEDSSE TKVDNILTDD EKKRIEEENY SNKGAKAKNS 
IAIGHKAKVE ANAENAIAIG IGAVATKKDS IVLGSESKET ANTDNSGYDI TTQKSSTLMD 
AKWKPTHGEL AIGDGVNKTR RITGVAAGYE DTDVVNVAQL KQVSSGLLKD KDLIFAGNDS 
KEVKVGLGEK LNIIGEGSFN EGTAKDNIKI IKTADDTLTI GLAEDLKDIN KITTKTNTNG 
QKSILSTEGL KVTGKDSKET SVTSENIEVK NSADKTILSA SGLKITDKDG KDTDKSNILT 
KTSITLKDKS NNKEVTNTIT ADKSEITNNT GDKTTITADK ITVANGTDKV EITKNSLLGA 
TTIGKDADNS LIFGSGTTDN TTTKLKVGGK ELTFTKAGEH IKISNVANGK DDNDAVNVSQ 
LKEYVKVLGG NAKFENGNLT APTYMLKAGE AAPKSYNTVG DALNALDNAI GTSTKNIADL 
TNKQISFQGN DGDANKVSKK LGETLKIQGE GTVNGATAKD NIKVTKNATD DGLDIKLAEN 
LKNLNSIETK DNNGNKTKVD TNGVEVTSND NKANLTADKL TFGPKETTSA DKTSTEVGKE 
GITLKGKDGN ESVSIKTENN AGTITVKDKD GKDTIKINGE KGSITGLKDI SPNEKDGSIA 
VNKNYVDSQI KAIANGPFEY ETSDGEKVVR GQDNKLYKES ELKDYYYDEA TSKYKHKTNG 
MNNQEPKALE NKDVTVNVMP KNGTPISIGN VASILGEEAT KTSDKAAEKV KELIGNSDNS 
KNKVATGTDV LALAMAGINF SGNEGSGEKI HRNIGEQVTI KGEGTDSKDD FTSASGNIQV 
KSDKDKGELT VKLSDKLTNM TSFETKELDD NGNKSKVKLD KEGLTTINKT DDNKYIMSKT 
GPNGTEIGKY DVNPLEKSNN NAQPTTSAKY TLEGTTIKDD KGSSNLTSNT LTLKDKDDKQ 
RITLDNKGDT PTISLSNKEG EETVKIDGGN GKDKESSISF KVDNDKGLGV VKGLRDLTDN 
DPGHYAVNKR YVDNKLNGAL GGVANAIAVA SIPQINGKGH NIGASYGYYE GHSAFALGLS 
GINERGNVLY KANLSLNTRG NVGIGAGIGY QFGGDDVRRE EVIIENNPSN DIRDRLIEQN 
EKLINQNKKL EEDNDRLRRE NDRIGDEIKE LRERIKAIEK IKMNEDDLYT LDGYRLGIHE 
LTSSQEEMLM NIVRELNENY KNRKIYITGY TDNVSGEDLN LELGLKRANV VAKKLRELGL 
DMSISIRKVS SSGYNNIVET NKSSSGRSSN RRVEIELR