| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smon_0711 |
|---|
| Symbol | |
|---|
| ID | 8600435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptobacillus moniliformis DSM 12112 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013515 |
|---|
| Strand | - |
|---|
| Start bp | 804173 |
|---|
| End bp | 806032 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | |
|---|
| Product | VacB and RNase II family 3'-5' exoribonuclease |
|---|
| Protein accession | YP_003306061 |
|---|
| Protein GI | 269123484 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TTTTTGAAAG TAAATTTATA TGTAAAAACA AAAGAATTGC TTTTGCATAT
ACTGATAATA ATGAGAAAGT ATTAATTAGA GATATAAATT TTAATAATGC TTTCGATGGA
GATACTGTAA TAGTTGAAAT AATAGATAAT GAAAGACTTA TAGGTAAAGT CAACAAAATA
GTTAAAAGGC AAGATAGCCC ATATTTTGGA AATGTTATAC TATGTAAAAG AAATAAATAC
ATTATTAGAT TAAATCGAAG TGATTTAATA GTTACTACTA CTACAAAAAA AATCAATATT
AAACACGGAG ATATATTAAG TTTTAACATT GATTATACAA CATTAAATAA AGATGACATT
AAAGTTAATA TTCTTAATAA TTTTGGTAAT ATAAATAATT CTGACAATAT ATTAAACTCT
TTATTAGATG CTTCAAATAT ATCTAAGGGA TTTTTAAATG AAATAAAAAA AGAGGTTGTA
GAAATTAGAA GACCTAATGT ATCTGAAGAA TTAAAATATA GGGTTGATTT ACGTCATCAA
AAAACAATTA CAATTGATGA TATAAGTGCA AAAGATTTAG ATGACGCTAT TTACCTTGAA
AAAGAAGAAA ATCACTACAT ATTATATGTA AGTATAGCAG ATGTTTCATA TTTCGTTAAA
GAATACTCTA AACTTGATTT TGAAGCTGCT AAAAGAGGTA ATAGTATTTA TTTGGCTGAG
CAGGTTATAC CCATGTTGCC TAAAAAGCTT TCTAATAACT TATGCTCTTT AAATCCAGAT
GAAGATAAAT TAACTTTTAC AGTAAAACTT AAATATGATC TAAATGGTAA ATTGATTGAA
AGTGATTTCT TTAAATCTAT TATTAAATCA CATCATAGAT TAAATTATAC TGATGTTAAT
AAAATGTTTG ATAACAATGA TAAGAGCTAC CCTATTTTAT GGGATATGTT AGAACTTTCT
AAATTATTAA GAAAACAAAA AAATAAAAAA GGTATGATTA ATTTCAATAT TCCTGAAATA
AAATTAATAC TTGATGAAAA TGGCGATATA AAGGAAATAT CAAAAAGAAT ATCAGGATTA
TCTCAAGAAT TAATTGAAAA TTTCATGGTT GCTGCTAATG AGGCTGTTGC TGAATATCTA
CATTGGCAAA ATATTCCTGC TATTTATAGG GTGCATGAAG CTCCTGAAAT TGATACATTA
AGAAGTTTAA ATAAAAAACT TAATATATTG GGATATAACA TAAATAATGT AATGGATATA
CATCCAGGTA AAATAGCTAA AATAATAGAT AAAAGCTCTA ATGATGAAAA TTCATATTTA
ATTCATAAAA CTGTATTACA AGCTATGAAA AGAGCTAAAT ATATGAATGA AAATAAGGGG
CATTTTGGTT TAGCATTAGA TAATTATCTC CACTTTACAT CACCAATAAG AAGATATTCT
GATTTAATTG TTCATAGAAT GCTTCAATTT ACATTAAATA ATAAAAAAAT CTCCACTAAA
TATATTGATA AGAAAAAAGA GGAATATAAA TTAATAGCAG AGCATATATC TAAAACAGAA
AGAGTTGCTG AAAGACTTGA AAAAGACTCT ATAAAATTAA AATTATTAGA CTATATGAAA
AAACATTTAA ATGAAGTATT TGAAGCAAGA ATATCTGGTA TTATTAGAGG TAAAATATTT
CTTCAATTAG ATAATTTAAT TGAAACCGTT TTTTATGATA ATATTAGTTC TAAATATATT
ATAGATGATG CTTTATTAAT TGATAATAAA GGAAATAAAT TTAATATTGG TGATAAGGTA
AAAATAAAAA TCATAAAATT AGATTATGAA AGAATAGAAA TTATTTCGGA GGTACTATAA
|
|---|
| Protein sequence | MNKIFESKFI CKNKRIAFAY TDNNEKVLIR DINFNNAFDG DTVIVEIIDN ERLIGKVNKI
VKRQDSPYFG NVILCKRNKY IIRLNRSDLI VTTTTKKINI KHGDILSFNI DYTTLNKDDI
KVNILNNFGN INNSDNILNS LLDASNISKG FLNEIKKEVV EIRRPNVSEE LKYRVDLRHQ
KTITIDDISA KDLDDAIYLE KEENHYILYV SIADVSYFVK EYSKLDFEAA KRGNSIYLAE
QVIPMLPKKL SNNLCSLNPD EDKLTFTVKL KYDLNGKLIE SDFFKSIIKS HHRLNYTDVN
KMFDNNDKSY PILWDMLELS KLLRKQKNKK GMINFNIPEI KLILDENGDI KEISKRISGL
SQELIENFMV AANEAVAEYL HWQNIPAIYR VHEAPEIDTL RSLNKKLNIL GYNINNVMDI
HPGKIAKIID KSSNDENSYL IHKTVLQAMK RAKYMNENKG HFGLALDNYL HFTSPIRRYS
DLIVHRMLQF TLNNKKISTK YIDKKKEEYK LIAEHISKTE RVAERLEKDS IKLKLLDYMK
KHLNEVFEAR ISGIIRGKIF LQLDNLIETV FYDNISSKYI IDDALLIDNK GNKFNIGDKV
KIKIIKLDYE RIEIISEVL
|
|---|
| |