Gene Smon_0301 details

Gene Information

• Locus tag: Smon_0301
• ID: 8600010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: +
• Start bp: 356111
• End bp: 362338
• Gene Length: 6228 bp
• Protein Length: 2075 aa
• Translation table: 11
• GC content: 30%
• Product: YadA domain protein
• Protein accession: YP_003305662
• Protein GI: 269123085

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA TGAAAAAGAT TGAAATAAAA AAGTTTTTAA AAAGTTCTCT AAAGAATAAG 
GTAAGTATAG ATGAAAAAAC AGTATTACGA TATATAATAC TTGGTTTTGC AGGATTATCA 
GCAATGTCTT ATGGTTCTTG GTTAGCTATA AATGATAGTA CTGGAACTGT TGGTAAATCT 
GGAGTAACTT CAGAAGATGG AGAAAACAAT AGTAAAAATA ATGTGATATT AGCTAAATAC 
GAAAATACAA ATAATACTTC TAGTTCAGTA GTAATAGGAG CAGGTGGAAA AACTTATGGT 
AAGGGTTCAG AAAATGTAGT AATAGGATTT AATGCAAATT CAGAAAAATC TCAGAGTGTA 
GTAATAGGAG CTAACACTAA ATCAGATTTA CAAAATTCTG TAATTCTTGG TAGTAAATCT 
TATGTGTATA AAGATCATTT TAACATAGGT AATGGTGTAA CAGAAGATGA TGGACAAGGA 
GTTGCAATAG GTAACTCTGT ATTTTCAACT GCACAAGCAA CTTCTATAGG AAATAATACA 
TATGCTATAG GAAGATCATC TATAGCTATA GGTAATGATG ATATATCAGC ATATGAAAAT 
AAAGTTACTC AACATGATTA TGATAGTTAT TTCAAAAAAC TTTATGAAAA GATAGATAAA 
GATGGAACTC TATATGGTTA CGGAAGTAAT AATAAAACAG ATGCAAGTAA ACATAAATGG 
TCGCCAACAC TAGCACAAGG ACATGGATCA ATAGCCATAG GTTCTCGTTC TATAGCCTAT 
GCTGATGGTT CAACAGCACT AGGAACTCTT GCTTATGCCC TTAAGAATGG ATCTACAGCA 
GTAGGAACAT TAACAAGGGC AGAAGGAGAA GGAGCTATAG CAATAGGAAG AGAAACTAAT 
GTATTTGCTA ATAATGCCAT AGCTGCTGGT AATAAAACAT TAGTATTAGA AGAAGGAGGA 
GCTTCATATG GTTTGTCAGC TATTTCAGGA GGTAAAAACT CTGTAGCAAT AGGAACAGAT 
GTTTATGCTA ATGTTGAGTA TGATTATAAT AATACTAATA TAGAATTAGG TGGACCTCAA 
AAAGCCGTAT CAACAGGATT ATTTGGTAAA TTATCTGAAT ATGGTAAACA AGATAATGAT 
GAAGAAAAAA GAGGGCTATA CGGATTTGAC TTAAATGGAG TTGCTAAAAC CTTAATAGGT 
CTTGGAAAAG ATAATCCACC TAATAATGTA AATGGAGCTC AAAAAGGAGA TTATTTAAAA 
AGTGGAACAT ACTTTAATCA ATATAAAAGC TATATTGATG GATTAGAGAG TGGACTAACT 
AATGCGAAGA CTAAAGATAC AAAAAAATCA ACAAACTCAA TAACAATTAA AACACAAACA 
AAAAATGGAG TAGAAAATAT AGCTAAATCT AGTGGAAAGA ATGCAATAGT TATAGGAAGC 
AAATCAGGAG CATTTGGGGA TAATGGAATA GCCTTAGGTA GAGGTTCATT TTCACTTAAG 
GAAAATTCAA TATCAATTGG ATCTTATTCA TATACAAAAG AGAAGAACTC AATAGCACTT 
GGTATAGCAT CAAGAGCTTT AGCAGAAGGT TCATTAACAT TTGGTAATGG TGCTGGAGTA 
GATATTAGTG GAAAAAACTC TATGGTATAT GGACATGGAT CAGTAGCTTA TGCTCCTAAT 
TCAATAATAC TTGGGATAAA CTCTCGTGTA TGGGGAACTG ATAAAGATGG AGATTCTATC 
ATAATAGGTA ATGATGCCAA TATAAGTGAA TTAAAAGATA GTAATGGTAC AAAATTAGAA 
GGACACAATG GTAAATCAGT ACTAGCATTA GGGAATAAGA CTAATGCAAC ACTTGATAAT 
TCAGTGGCAT TAGGTTATCT TTCAGCTACA GATTATCAAA AAACAGATTT AGAGAAACCA 
GGGTATACGG CAAGAGGATC ATATTCTATA CCAACTTCAG CAAAGGTTGG AGTAATATCA 
GTAGGTAAAA AGGGATATGA AAGAAGAATA ATTAATGTTG CATCAGGATA TAGGGATTCA 
GATGCAGTAA ATGTTGCTCA ACTTAAAACA TTAGAAGATA GATTAGATGG AGCAACAGAA 
GAAACAGATG ATAAAGTTAG ATATTTTTCA GTTAATACTG ATAATGATCT AAACGATATA 
GCAAGAAAAG AAGTGGATTA CAGAAACTAT GTAAAATTAA AAACGCAGAT GTTAACGATA 
GATGCTAGAA AAGAAAATGG GGAACAAATA AAAGAAGAGA ATATTAAAGA ATTAAAAGAT 
AAGTTAACTG AATTAGAGAA TAAAAATGGA ACAAAAGATA AAGCTACTTC TCTTAAAAAC 
CTAGGAAGTC CTAAAGATAC CAAATATAAA ACTAATGGTT CTTTTAATAT AGATAAATAT 
ATGGAGGCTT TAGAAAAAGC TAAACAAGAA GATTTATCTG AAAATAGAAT AAAAGATATC 
TTAACTATGG AAGAAAAAAA TAAAATAGAG GAAGCAAACT ATTCTAATAA GGGAGCAAAA 
GGTAAAAATT CTATAGCAAT AGGACATAGT GCTAGTACAG AACAAAATGC AGAAAATGCT 
ATAGCGATAG GAATGGGAGC AAAAGCCACA TCTAAAAATA GTATAGTTTT AGGAAGTGAA 
TCTAAGGAAA CTGCCGATAC AAATAATGCA GGATATGATA TTACTACAAA AACAAGCTCT 
AATTTAATGG ATCCAACATG GAAACCAACT CATGGAGAAT TTGCTATAGG TAATGATTCA 
ACAGTTACTA GAAGAATAAC AGGAGTAGCA GCAGGAGAAA AAGATACAGA CGCTGTAAAT 
GTGGCTCAAC TTAAACAAGT TTCATCAGGG TTATTGAAAG ATAAAGATTT AAAGTTTGCT 
GGAGATGATG GTCAAGAAGC TACAGTTAAA TTGGGAGAGA CACTTAATAT TAAAGGAGAA 
GGAACAGTTG CTAATGGAAC AGCTGTAAAT AACATAAAAG TAACAGCAGA TAAAGATAGT 
AAAACATTAA CGATAGGATT ATCAGAAGAT TTAAAAAATA TAAGTACAAT AAAAACTAAA 
AAGGGTACAG ATAATAAAGA AACAGAATTA TCTCAAACTG GTATTAAAGT AAAAGGAGAT 
AATAGTAAAG AAACAGAAAT TACGTCAGAA ACTGTAAAAA TTAATGATGA TAAAGATAGT 
TCAAAACTTA CTTCAAAAGG ATTAGAAATT GGAAGTAAAG ATGGAAATGA TGAAAAAACT 
AATAAACTAA CTAAAGATTC TATAACATTA ACAGATAAAA GTAATGGAAA AGAGATTACA 
AACACTATAA CGGCAACTTC AAGTGAAATA AAAGATAAAG AAAATAATAG CGTTAAGATA 
GAAGCTAATA AAATAACAGT GTCAAAAGGA AATGATAAGG TAGAAATTAC TAAAGATTCT 
CTAATGGGAG CAATTACTGT TGGTAAAGAT ACTAATAATA GTTTAATATT TGGTAATGGT 
AATAATACAT CTACAATGTT AAAAGTTGGT GGAAAAGAAT TAACATTCAC TAAAGCAGGA 
GAACATATAA AGATATCAAA TGTAGCAAAT GGAAAAGATG ATAACGATGC TGTAAATGTA 
TCACAACTTA AAGAATATGC AACATTCCTA GGTGGTGGAG CAGAGTTTAA GAATGGAACA 
TTTACAGGAC CAACATATTC ATTAAAAGCT GGAAGTAATA CAACAACTGA TCATAAAAAT 
GTTGGAGATG CCTTAAAAGC TTTAGATGAT GCTATAGGAG CTTCAAATAC TAATATAAAG 
GCTTTAGAAA ACAAAGCAAT AACATTCCAA GATAATGATG GAAATGAGGT AAAAAGAAAA 
TTAGGAGAAA CTTTAAAAAT ACAAGGTGAA GGAACAGTTA ATGGGGCTAC AGCCAAAGAT 
AATATTAAAG TTACAAAGAA TGATACTGAT GATGGATTAG ATGTTAAACT TGCTGAAAAT 
TTAAAGAATC TAAATAGTAT AGAAACTAAG GAAGAAAAAG GAAAGAAAAC AAAAATCACA 
ACAGATGGAG TAGAAGCTAC TAATGGAACT AATAAAGCTA ACTTAACAGC AGACAAGTTA 
ACATTTGAAG CTAAAGATAA ATCAACTGAT AAAACAAGTA CAGAAGTTGG AAAAGATGGA 
ATAACATTAA AAGATAAATC AGGCAATGAA TCTGTGTCTA TAAAAACTGA AAATAATGCA 
GGAACAATAA CTGTAAAAGA CAAAGATGGA AAAGATACTA TAAAAATAAA TGGTGAAAAA 
GGTTCTATCA CTGGTCTTAA AGACATATCT CCTAACGAAA AAGATGGAAG CATAGCAGTT 
AATAAAAATT ATGTTGATAG TAGAATAAAA GCAATAGCTA ATGGTCCGTT TGAATATGAA 
TCAAATGATG GTAAAAAAGT TGTAAGAGGA GAAGATGGTA AGTTATATAA GAAAGAAGAT 
TTAGATAAAT TTTACTATGA TAAAACTTCA TCTACATATA AACCCAAAAA TACTACTACA 
AACCCACAAC CAACATTAAC AGAAGTAACT AACAAAGATG TAACAGTAAA TGTAATGCCT 
AAGAATGGAA CACCAATATC AATAGGAAAT GTGGCAAGTA TATTAGGAGA AGAAGCAACT 
ACAACATCAG ATAAAGCTGC TGAAAAAGTT AAAGAACTAA TTGGAAATTC TGATAATAGC 
AAAAACAAAG TAGCAACAGG AACAGATGTA TTAGCATTAG CTATGGCTGG AATAAATTTT 
TCAGGTAATG AAGGTTCAGG AGAAAAAATC CATAGAAACA TAGGAGAACA AGTAACCATT 
AAAGGTGAAG GAACAGATGG TAAGAATAAC TTTACTAGTG CAAGTGGAAA CATACAAGTT 
AAATCAGATA AAGATAAAGG AGAATTAACA GTAAAACTAT CAGATAAGCT AACTAACATG 
ACTTCATTTG AAACAAAAGA ATTAGATGAT AATGGAAATA AATCTAAAGT TAAACTAGAT 
AAAGAAGGAC TAACTACAAT TAATAAGACA GATGATAATA AATACATAAT GTCTAAAGCA 
GGACCAAATG GAACTGAAAT AGGTAAATAT GATGTTAATC CATTAATGAA TGGTAATAAT 
AAAGCTCAAC CAACTACAAG TGCAAAATAT ACATTAGAAG GAACAACAAT AAAAGATGAT 
AAAGGAAGTT CTAACCTAAC ATCAAATACA TTAACTTTAA AAGATAAAGA TGATAAACAA 
AGAATAACAT TAGATAATAA AGGTGATACT CCAACTATTT CTTTATCAAA TAAAGAAGGA 
GAAGAAACAG TTAAAATAGA TGGAGGAGAT GGAAAAGATA AAGAACCAAC AATATCATTT 
AAAGTAGATA AAGATAAAGG ATTAGGAGTA GTAAAAGGTT TAAGAGATCT AACAGATAAT 
GATCCAGGAC ATTATGCAGT AAATAAGAGA TATGTAGATA ATAAATTAAA TGTAGCCTTA 
GGAGGGGTAG CAAATGCAAT AGCAGTAGCA AGTATACCAC AGATAAATGG AAAGGGACAT 
AATATAGGAG CATCATATGG ATATTATGAA GGACATTCAG CCTTTGCATT AGGGTTAAGT 
GGAATAAATG AAAGAGGAAA TGTATTATAT AAGGCAAACT TATCATTAAA TACAAGAGGA 
AATGTAGGTA TAGGAGCAGG GATAGGATAT CAGTTTGGAG GAGATAGAGT TAATACAAGT 
AAAGATAATA TAATAATAGA TAATTCATTA GATGAATTAG ATGGAATAAA TAAGAAGTTA 
GAAGAACAGA ATAATAAACT AATTGCACAA AATAATAAGT TAAATGAGAA AAGAGGAGAT 
CTAAGTAAGG AATTAAAAGA ACTTAAAGAT AAGATAAGTG TAATAGAAAA AATTAAGATG 
AATGAAGATG ACTTATACAC ACTAGATGGA TATAGATTAG GTATACATGA GCTAACAAAG 
AGCCAAGAAG AGATGTTAAA GAATATAGTA AGAGAGTTAA ATGAGAACTA TAAGAATAGG 
AAGATATATA TAACAGGGTA TACAGATAAT GTATCAGGAG AGAATTTAAA TCTTGAGTTA 
GGTTTAAAGA GAGCAAATGT AGTAGCAAAG AAACTAAGAG AGTTAGGCTT AGATATGAGT 
ATATCAATAA GGAAGGTAAG TTCATCAGGA TATAATAATA TAGTGGAAAC AAATAAGAGT 
TCAAATGGAA GGTCTTCTAA TAGAAGGGTG GAGATTGAAT TAAGGTAA 

 

Protein sequence

MKKMKKIEIK KFLKSSLKNK VSIDEKTVLR YIILGFAGLS AMSYGSWLAI NDSTGTVGKS 
GVTSEDGENN SKNNVILAKY ENTNNTSSSV VIGAGGKTYG KGSENVVIGF NANSEKSQSV 
VIGANTKSDL QNSVILGSKS YVYKDHFNIG NGVTEDDGQG VAIGNSVFST AQATSIGNNT 
YAIGRSSIAI GNDDISAYEN KVTQHDYDSY FKKLYEKIDK DGTLYGYGSN NKTDASKHKW 
SPTLAQGHGS IAIGSRSIAY ADGSTALGTL AYALKNGSTA VGTLTRAEGE GAIAIGRETN 
VFANNAIAAG NKTLVLEEGG ASYGLSAISG GKNSVAIGTD VYANVEYDYN NTNIELGGPQ 
KAVSTGLFGK LSEYGKQDND EEKRGLYGFD LNGVAKTLIG LGKDNPPNNV NGAQKGDYLK 
SGTYFNQYKS YIDGLESGLT NAKTKDTKKS TNSITIKTQT KNGVENIAKS SGKNAIVIGS 
KSGAFGDNGI ALGRGSFSLK ENSISIGSYS YTKEKNSIAL GIASRALAEG SLTFGNGAGV 
DISGKNSMVY GHGSVAYAPN SIILGINSRV WGTDKDGDSI IIGNDANISE LKDSNGTKLE 
GHNGKSVLAL GNKTNATLDN SVALGYLSAT DYQKTDLEKP GYTARGSYSI PTSAKVGVIS 
VGKKGYERRI INVASGYRDS DAVNVAQLKT LEDRLDGATE ETDDKVRYFS VNTDNDLNDI 
ARKEVDYRNY VKLKTQMLTI DARKENGEQI KEENIKELKD KLTELENKNG TKDKATSLKN 
LGSPKDTKYK TNGSFNIDKY MEALEKAKQE DLSENRIKDI LTMEEKNKIE EANYSNKGAK 
GKNSIAIGHS ASTEQNAENA IAIGMGAKAT SKNSIVLGSE SKETADTNNA GYDITTKTSS 
NLMDPTWKPT HGEFAIGNDS TVTRRITGVA AGEKDTDAVN VAQLKQVSSG LLKDKDLKFA 
GDDGQEATVK LGETLNIKGE GTVANGTAVN NIKVTADKDS KTLTIGLSED LKNISTIKTK 
KGTDNKETEL SQTGIKVKGD NSKETEITSE TVKINDDKDS SKLTSKGLEI GSKDGNDEKT 
NKLTKDSITL TDKSNGKEIT NTITATSSEI KDKENNSVKI EANKITVSKG NDKVEITKDS 
LMGAITVGKD TNNSLIFGNG NNTSTMLKVG GKELTFTKAG EHIKISNVAN GKDDNDAVNV 
SQLKEYATFL GGGAEFKNGT FTGPTYSLKA GSNTTTDHKN VGDALKALDD AIGASNTNIK 
ALENKAITFQ DNDGNEVKRK LGETLKIQGE GTVNGATAKD NIKVTKNDTD DGLDVKLAEN 
LKNLNSIETK EEKGKKTKIT TDGVEATNGT NKANLTADKL TFEAKDKSTD KTSTEVGKDG 
ITLKDKSGNE SVSIKTENNA GTITVKDKDG KDTIKINGEK GSITGLKDIS PNEKDGSIAV 
NKNYVDSRIK AIANGPFEYE SNDGKKVVRG EDGKLYKKED LDKFYYDKTS STYKPKNTTT 
NPQPTLTEVT NKDVTVNVMP KNGTPISIGN VASILGEEAT TTSDKAAEKV KELIGNSDNS 
KNKVATGTDV LALAMAGINF SGNEGSGEKI HRNIGEQVTI KGEGTDGKNN FTSASGNIQV 
KSDKDKGELT VKLSDKLTNM TSFETKELDD NGNKSKVKLD KEGLTTINKT DDNKYIMSKA 
GPNGTEIGKY DVNPLMNGNN KAQPTTSAKY TLEGTTIKDD KGSSNLTSNT LTLKDKDDKQ 
RITLDNKGDT PTISLSNKEG EETVKIDGGD GKDKEPTISF KVDKDKGLGV VKGLRDLTDN 
DPGHYAVNKR YVDNKLNVAL GGVANAIAVA SIPQINGKGH NIGASYGYYE GHSAFALGLS 
GINERGNVLY KANLSLNTRG NVGIGAGIGY QFGGDRVNTS KDNIIIDNSL DELDGINKKL 
EEQNNKLIAQ NNKLNEKRGD LSKELKELKD KISVIEKIKM NEDDLYTLDG YRLGIHELTK 
SQEEMLKNIV RELNENYKNR KIYITGYTDN VSGENLNLEL GLKRANVVAK KLRELGLDMS 
ISIRKVSSSG YNNIVETNKS SNGRSSNRRV EIELR