Gene Sdel_1802 details

Gene Information

• Locus tag: Sdel_1802
• ID: 8593354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 1829334
• End bp: 1830056
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 41%
• Product: polysaccharide deacetylase
• Protein accession: YP_003304852
• Protein GI: 268680421

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTGATTA ACATTATGTA CCATCACGCC AATAAAGAGG TTTTTAGCAA TAGCGTAGAA 
ATGCTTGAAG CGCATTTTGC TTACATTAAA GCGCATTTTA CCTGCGTACT TCCAGGGGAG 
AATATCACGC AAACTTCAGT TTGTCTTACC TTTGATGATG GCTATTGTGA TTTTTATTTT 
TTAGTCTATC CGCTCTTAAA AAAGTACCAA CTCAAAGCGC TTTTAGCCTT CTCTAGTGCG 
TATCTCATTC CAAACAGTTC TCTTTTAGCA GAAGAGCGCA TGGCATTTTC TCACCAAGAA 
GCCCACGCAA ACTATAAAAA AGGGACATTT TGCACCATAG AAGAGATGAA AGAGATGATA 
GCCTCAGGGC ACGTCATGGT AGCCTCTCAT GCCCATTCGC ATACCAATCT TTGCCTACCC 
AACACGGATA TGGAGCTTGA AATTAAAACC TCTAAAAAAC TCCTAGAAGA AGCCTTAGGC 
GTTGAAGTAT CGAGTTTTGT TTTTCCTTTT GGTAAATACA ATGCTGCCAT TTTAGAGGAG 
ACGCAAAAGC ATTATCGCTT TATTTTTCGC ATTGGTAACG CTTTGCAGAG CGATTTTTCA 
GGCATTCGAG GACTCAATTA TCGCATCAAC GGCGATGGCA TGCAAACACC GCATGCGCTC 
TTTTGCCTTA AAAATCTCAC GCTCTTTTGG CTCAAAGGCT TTTTCAAAAA GGTACTCGGA 
TGA 

 

Protein sequence

MLINIMYHHA NKEVFSNSVE MLEAHFAYIK AHFTCVLPGE NITQTSVCLT FDDGYCDFYF 
LVYPLLKKYQ LKALLAFSSA YLIPNSSLLA EERMAFSHQE AHANYKKGTF CTIEEMKEMI 
ASGHVMVASH AHSHTNLCLP NTDMELEIKT SKKLLEEALG VEVSSFVFPF GKYNAAILEE 
TQKHYRFIFR IGNALQSDFS GIRGLNYRIN GDGMQTPHAL FCLKNLTLFW LKGFFKKVLG