Gene Sdel_1559 details

Gene Information

• Locus tag: Sdel_1559
• ID: 8593099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: -
• Start bp: 1572222
• End bp: 1574342
• Gene Length: 2121 bp
• Protein Length: 706 aa
• Translation table: 11
• GC content: 44%
• Product: TonB-dependent receptor plug
• Protein accession: YP_003304610
• Protein GI: 268680179

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000264695
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTATA AAGGCTTATG GCTCTCTTTG GCCGCTGCAA GTGTTTTAAT GACAAGTGAA 
ACCACACTTT TAGAAGAAAT TACCACCATT TCTACTGCCA CTAAATCGGA AAAGAATATT 
GATGGAGTGA GTGCTAGTGT TGTTGTGATT GATGAAGAGG ATATTGCACG TTTGGGCGCA 
GAATCGCTTA AAGATATTAT CACCAAAACC CCTGGTCTTA GTGTTCAGTA TGGAACATTT 
CCCAGTGCGA GCAGTGCCTC TAAAGGCTCT TTAGTCCTTC GTGGTATGGG AGCTAAGGGA 
ACGCTTCTTT TGGTTGATGG CAGACGTTTG AGTGGAGAAG TCGCCAATCC CTATGATTTG 
GAGCGAATCC CAGCTTCTCA AATTGAGCGT ATTGAAATCG TTAAAGGTCC TATGAGTACG 
CTCTATGGGG CAGATGCAAC GGGTGGCGTG GTGAACATCA TCACCAAAAA GCCAAAAAAT 
GAACCTCACG TGGATGTTGG GGTGCGTTAT GGTGCCAATG GACATGGCGA AGATGAGAAT 
AAAAACGCCA ATATCGCCAT TCGTGGAAAA TATGAAAAGC TAGGGTATAG TTTCTACGCC 
AATGAAACGC ATACCACTCC ATATACCCAA AAAGAAAATG GCGATGTGTA CGCTAAAGCA 
GGTGTAAACA CGTTGGTTAA ACCCTCCGCA CATCCAAATC CTAATATCAG TACTAAATTA 
CCCAATAGCT ATGAGAATGT TGACGTTAGC TACCGTGATG AGAGTGAGGT CTCGACACAA 
GGTGGGCGTT TGACGTACGA TATTAGTGAT AACATTGTGG CGGGGATTGA GTTTAACCAT 
TTCACTGAAG AGCGAGATGG AACCTACTTG AGTTATTTTC ATCCTACCGC TTACACCATT 
CCAGCGTTTA ACGTGCCTGT CAATTCTGAA GATGAAAATG AACGCCTTGA TATTGGGGCG 
GATGTTAAAA TCAAAGCGAG CGATACGCTA ACTCTCATGC TTCGAGCCTA CAACAGTTCG 
TATGAAAAAC GAAGTACCAT CACCGCCAAA TATTGGGCAG ATATGGGCTA TACCTCCGAA 
GCGGCATCGG CGCAAAATGG TATGGATGCT AATGTGGACA CTACGACCTA TGAAGCCAGT 
GCCAATTATT TGATTCATGA TGACCACCTC TTAACTTTTG GCATAGAGCG ACGTTTTGAA 
GAGCGTGAGG GAAGTGTCTT TACCTTAGCC AATACGATGA GTACTAAAAA AGTGGATTAC 
ACTGCTGGGT ATCTGCAAGA TGAGTGGCAA GCCACAGAGG ATTTGAGCAT TACACTGGGT 
GGGCGTTTTG ATGAAATTAG CAACGCTGAT AGCAAAGCCA CGTTTAAAAT TGGCGCAGTG 
AATCGTTTTG ATGAAGCGTT ACATGTAAGA GCCAATTTTG CGCAAGGGTA TCGAACGCCT 
GACATCAGAG AGCTTTACAT CTATAAAAAT ACCGCCACAG GCGTACAGCG TGGTGCTGAG 
GTTATTGATG CGAGTGTGGG TAAAACCAGT GCGTATGATT TAAAGCCTGA ATTTACCAAC 
AGTTATGAAC TAGGTGCGAG TGGAAAAGTG GGTGTAGGTA AGTATGACTT TACGCTTTTC 
TATAATGACA TTGAAGATAT GATTTCTGAG GTCAATACGG GGAATTATTA TACGTTTATC 
AATGTTCCTA AAGCTAAAAC TTATGGAATG GAAGCCTCAT GGGCGCAACC TCTCTTATCC 
CATCTTGATG TGAGCCTTTT TTGGAGTGAA CTTCGTACGA AAAACAAAGA GAGCGGGAAG 
GATTTGGAGT TTACGCCAGA GCGTATGCTA GGCGCAAAAC TTGATTATGC ATTGAGCAAA 
GCGCTTTCAA GTTATGTGGG AGTGAACTAT GTTGGTGAGC AGTATTATCT TAAAACATTA 
AACCGTGGAA CACCGAGCCA AATCCTTGTT GATGCCACCG CCGATGGTTA TGTGAGTGTG 
AATTGGGGTG TGAATTATGC GCTTAATAAA ACCGTGACAC TCTATGGAGG CATTAACAAC 
CTCACCAACG AAGGGGTGGA CGATGTGCTA GGCAGTAGCA GTGGGCGTTA CTTCTTTGTG 
GGCGCAAAGG CGCATTTATG A 

 

Protein sequence

MNYKGLWLSL AAASVLMTSE TTLLEEITTI STATKSEKNI DGVSASVVVI DEEDIARLGA 
ESLKDIITKT PGLSVQYGTF PSASSASKGS LVLRGMGAKG TLLLVDGRRL SGEVANPYDL 
ERIPASQIER IEIVKGPMST LYGADATGGV VNIITKKPKN EPHVDVGVRY GANGHGEDEN 
KNANIAIRGK YEKLGYSFYA NETHTTPYTQ KENGDVYAKA GVNTLVKPSA HPNPNISTKL 
PNSYENVDVS YRDESEVSTQ GGRLTYDISD NIVAGIEFNH FTEERDGTYL SYFHPTAYTI 
PAFNVPVNSE DENERLDIGA DVKIKASDTL TLMLRAYNSS YEKRSTITAK YWADMGYTSE 
AASAQNGMDA NVDTTTYEAS ANYLIHDDHL LTFGIERRFE EREGSVFTLA NTMSTKKVDY 
TAGYLQDEWQ ATEDLSITLG GRFDEISNAD SKATFKIGAV NRFDEALHVR ANFAQGYRTP 
DIRELYIYKN TATGVQRGAE VIDASVGKTS AYDLKPEFTN SYELGASGKV GVGKYDFTLF 
YNDIEDMISE VNTGNYYTFI NVPKAKTYGM EASWAQPLLS HLDVSLFWSE LRTKNKESGK 
DLEFTPERML GAKLDYALSK ALSSYVGVNY VGEQYYLKTL NRGTPSQILV DATADGYVSV 
NWGVNYALNK TVTLYGGINN LTNEGVDDVL GSSSGRYFFV GAKAHL