Gene Sdel_1333 details

Gene Information

• Locus tag: Sdel_1333
• ID: 8592873
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurospirillum deleyianum DSM 6946
• Kingdom: Bacteria
• Replicon accession: NC_013512
• Strand: +
• Start bp: 1349099
• End bp: 1349878
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 34%
• Product: diguanylate cyclase
• Protein accession: YP_003304388
• Protein GI: 268679957

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00918762
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TACCCAGCAA ACTGATTAAA AATCCTCTTC TAATAGGTTT CATCGCACTC 
ATGCTCAATC TTATTATTAG TACCATTCCT CTTCTTTTTT TATATGAAAA TTATCAACAA 
GCGCATCAAA GCTTAACCCA TTTAGAAACC TTTTTTAATT ATCTCAATTT CATTGAACTC 
ACGCTTCTTT ATGCTCTCTT TTTTTCATTC ATTTTTGCAA GCGTTATTGC GCTTTTCTCT 
TTTTTTCTTA AAAAATCTTA CCTTCAAATT GAAGAGCTCT CCCATTTTGA TGGACTCACC 
AAACTCTACA ACCGTCTCAT GTTTGTCACC CTTTTTCAAA AAGAGATTCA AAAAGTTAAG 
CGCTCAAAAA AATGCCTCTT TTTGGTTATT ATTGATTTAG ATGATTTTAA ATCCATTAAC 
GACAATTTTG GACACCTTAT TGGTGATTTA GCGATTAAAA CAACCGCTTC CACATTAAAA 
ACCATTTTAC GTAACTCAGA TACGATTGGT CGTTTTGGTG GTGATGAGTT TGTGATTTGC 
ATTGTGGATC ATGACAAAGA CGCTGCTTCA CACACCGTTA ATCGTATCTT AAATGAATTT 
AACCAAAAAA GTCTCCCCAT CACACGCAAT GACCAACCAC ATGAACTGCA CATTAACCTA 
AGCATTGGTT ATACCATGTA TAAAATAGAA GATGATTTTA CAACCATGCT CCAACGTGCC 
GATCAAGCGC TTTATATCTC CAAAGAAGCA GGTAAAAATA CCGCAACTTT TTTAGCCTAA 

 

Protein sequence

MKKIPSKLIK NPLLIGFIAL MLNLIISTIP LLFLYENYQQ AHQSLTHLET FFNYLNFIEL 
TLLYALFFSF IFASVIALFS FFLKKSYLQI EELSHFDGLT KLYNRLMFVT LFQKEIQKVK 
RSKKCLFLVI IDLDDFKSIN DNFGHLIGDL AIKTTASTLK TILRNSDTIG RFGGDEFVIC 
IVDHDKDAAS HTVNRILNEF NQKSLPITRN DQPHELHINL SIGYTMYKIE DDFTTMLQRA 
DQALYISKEA GKNTATFLA