Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_1281 |
Symbol | |
ID | 8592820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | - |
Start bp | 1297281 |
End bp | 1299170 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | type IV pilus assembly PilZ |
Protein accession | YP_003304337 |
Protein GI | 268679906 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTTAG AAGAGTTTTT ACAGGAGACA CGCTATTTAT CTATCGGACA TCTCTACTTT CATGAGGCAA AATTAACCTT ATTTGAGAAT GCCAAAAAAA AATTTGCACA CTTTGTCACG GTTGATGTTG AACATGAGAT GAAAACATTT CCTGATATGG ATGTTTTATT GATAGAAATT GGTGACGTTA GTAAAGAAAA GCTCAAACGT TTGGTGAGCC TTTTTACCAA ATATAAGCCA ATCGTGACTT ATCTTTTTAC CGATGATATT GAAAACAAAC TGCTCCTCAA ATTTGCCTTG CATTTTGGGA TTACCGATGT GCTTCCTCTT CTCAATCAAG AAAAAACGCT TCTTTCTATT TTTTCAAAAA ATCCCAATAA GCTTGATGAA AAGCTCCATC TTTTTAAAAA AACAGAGCTT GAAACTAAAA TAGAACAATT TTTTCCTTTT TTCCTTTTTC AAGGCAACCA TTTGGTCTAT GCGAATGCCA AAGCACAGAG GCTTTATGAA ACCAATGAAG TTGCGTTGAT TGAAGATAAG ATGTATTGTG ACGAGGATGT TTTGGCATTG TTGGAAAATA AAAGTGATGC ACATGGGATG ATAGTTCTCG ATGATGTTTA TTATATGGCG ATTGTGAAAT GTTTTCCTAA GAAAAATGAA AAAATTTTAA CGTTGATGAG TGATTTTCCA AGAGGGGAGA TAAAGGATTG TTCTTTTATG CTCAATCGTT TCGATTTTGT CGATCAACTT AAAGATCGTT TGGCACAGCA AAGTGTGACG CAAACAGAGA TTGCATTGAC CTTTATTTTG ATTTCAAATA GTGAGAAACT CTCTAAAAAT TTCAGCGGTT CAGCTTTGCA TGAGACATTA AAAAGGGTTT TGAATTTACT GTTTGACTTA ACCGAAGAGG ATCAAGCACT GGTTCAATGG AGTCCAAATC TCTACCTTAT AATGAGTGAA AAACGTCATT TTGAGCATGT ATGCAAACAG GCAAAGCATA TTCAAAAAGA GCTTATCAAC ACGCCTTTTC ATCCCCAAAT AAAACCTGTG ATTGTCACGT CTGCGATGGA GATTGATGCG ATTGATTTAA GCCAAAGCAT TGAGATTATT GAAAAAATCA ACACGCAGAC CTTAGTCCCT CATGATGTTG AACATATAGC GTATTATGAG GTTGCGTATC TGGATAATAT TTTAGATGAG GGGGAGCAGA TCGCTTATTT GATGCATCAT GCTATTCAAA ATAAACTTCC TATTAAACTG CTCAATATCT ATAAAGGTTT GTGTATTAAC ACCACCTCAA CCGTGTTAAA AATGTCCAAT AACACGTATC ACATTTCGTG TGAAAATTTA CAAGGTTATG CGATGCAATT AGAGGGAGAA ACGGTACTTC AAGCCTCTAA TTTTCCGAAA GATATCCGAG CAGAAGTGGC ATTTTTAGAT ATTAAAAAAT CCTTTGCTAT CATCAAAAAT CTCTCCTTCT TACCCAATAG CGCCAACAGC CGTCAGCACA CTCGTGTGCA AACAAGTTTT AGAACACCCA TTGTCATCAA ATATGCCAAA CGCTCTTCCG CGCAAGGGGA TATTCTTGAT ATTTCTGTGA ATTCGATTGC GATGAAAATC AAAAAACTTT TTCGAGAGGA AGAGTTAAAA GAGAGTAAAG TCCATCTCAA TTTTTCCCTT CCAAATGATA CTGGTGAATA CGGTTATGTG ATTATGGATA TTGACGCAAA AGTGACCCAT ATTTCGCAAC TGGATGAAGA TCATACAAAA GTAGTCGTCT TGCTAGATGA TTTGCCTAAG CCTTATGATG AGTATCTTTT ACACTATATG TATGCACGTC AAAAAGAGTT GATTTTGGAA ATTAGGCGTG CAACAAAAGC GTATAACTAA
|
Protein sequence | MLLEEFLQET RYLSIGHLYF HEAKLTLFEN AKKKFAHFVT VDVEHEMKTF PDMDVLLIEI GDVSKEKLKR LVSLFTKYKP IVTYLFTDDI ENKLLLKFAL HFGITDVLPL LNQEKTLLSI FSKNPNKLDE KLHLFKKTEL ETKIEQFFPF FLFQGNHLVY ANAKAQRLYE TNEVALIEDK MYCDEDVLAL LENKSDAHGM IVLDDVYYMA IVKCFPKKNE KILTLMSDFP RGEIKDCSFM LNRFDFVDQL KDRLAQQSVT QTEIALTFIL ISNSEKLSKN FSGSALHETL KRVLNLLFDL TEEDQALVQW SPNLYLIMSE KRHFEHVCKQ AKHIQKELIN TPFHPQIKPV IVTSAMEIDA IDLSQSIEII EKINTQTLVP HDVEHIAYYE VAYLDNILDE GEQIAYLMHH AIQNKLPIKL LNIYKGLCIN TTSTVLKMSN NTYHISCENL QGYAMQLEGE TVLQASNFPK DIRAEVAFLD IKKSFAIIKN LSFLPNSANS RQHTRVQTSF RTPIVIKYAK RSSAQGDILD ISVNSIAMKI KKLFREEELK ESKVHLNFSL PNDTGEYGYV IMDIDAKVTH ISQLDEDHTK VVVLLDDLPK PYDEYLLHYM YARQKELILE IRRATKAYN
|
| |