Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sdel_0558 |
Symbol | |
ID | 8592088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurospirillum deleyianum DSM 6946 |
Kingdom | Bacteria |
Replicon accession | NC_013512 |
Strand | + |
Start bp | 542169 |
End bp | 544826 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | DNA polymerase I |
Protein accession | YP_003303629 |
Protein GI | 268679198 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.851525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACAT TAACGATTAT TGATACTTTT GGTTTCTTTT TTAGGAACTA CTATGCCCTC CCGCAGTTAC GCAATTCCCA AGGGTTTCCC ACAGGTTTGC TAACAGGTTT TGCCAATTTT ATTTATGCGA TTAAAAATGA ACATGACACT GATTATGTGA TGTTTGCGCT TGATAGCAAA GGAAAAAATT TTCGCCATGA GCTAGACCCA AATTATAAAG CCAATCGTCC CGAAGCGCCT GAAGAGTTGA AAAAGCAGTT GCCCGTTGCG ATTTCGTGGA TTGAAAAAAT GGGCTTTAAG TGTTACAGCG AAGAGGGATT TGAGGCGGAT GACGTTATCG CTTCAGCGGT TAAATTTGCG AAAAGACATG GGATTAAAGT GCGTATTGTG ACCCACGATA AAGATTTGTA TCAGCTGATC GATGATGGAC GTGTGGTCAT TTACGATCCG ATGAAAAAAA TAGAAATTGA TAGCGAAAAG TGTTTTGAAA AATTTGGCGT CTATCCTGAT AAAATCAATG AGTATCTCTC TTTGGTGGGC GATACTGCGG ATAACATTCC AGGGGTTAAA GGCATTGGAC CTAAGGGAGC AAAAAAACTG CTGGATGATT TTGGGAGTGT TGAAAATATC TACGCAAATT TAGAACGTAT TGCAAACCCT CGTTCAAAAA GTATGTTAGA AGAGGGCAGA GAGAGTGCGT TTTTAAGCAA ACAGTTGGTA CGTTTGGATG ATAGCCTCAA TATCGCCGAT ACTTTTGAAG CGTTCTATTT TCCGTGCGAC AACCCTCTGG TGAATATTGC CGATGAATTA GAGAAGTATG AACTGCGTCA CATGCTCTCC CGTGTACGCA ATGAGGCTTT ACATGTAAAG ATAAAAGAAG CGCCTAGCAA CACTTTTAGG GCGATTTTGG TGGATGATGC CAAAATCCTT TTCAATGTGA TTGAGGGGAT TGAAGAGGGG AGTTGGGTTG CGTTTGATAC TGAGACCAAT GCCCTTGATG CGTACAATGC CAAAATTGTT GGTTTTTCGT TTGCTTTGAA TGAGCACGAA GCGTATTATG TGCCTCTTGC CCATCACTAC TTAGGTGTTG GAGAGCAGAT TGGGATGGAA GAGGCTAAAG AGGCGTTGAA AAAGCTTTTT AAGCATAAGA TTGTTGGGCA AAATCTCAAA TACGATTTGG CGGTCATTGA GAATAATTTT GGCTTACGTC TCTCTTCTTC TTATGCCGAT ACGATGCTAA TGGCGTGGCT TTTAAATCCT GAGAGTAACG TGGGGCTTGA TACTTTGGCA AAACGCTTTT TTAATCATGA CATGGTCAAG TTCAAAGATG TTGTCAGTAA AAATGAGAAC TTTAGCCATG TTCCTTTGGA TAAAGCGTGT GAATATGCGA GTGAAGATGC GTGGATGACA CTCAAACTTT ACAACAAATT GCATGATATG TTAGAACCTC GTCTCTTAGA AATTGCCAAA GAGGTAGAGT TTCCGTTTAT CCTGACGTTG ATGCGGATGG AAAAAGAGGG CATTAAGATA GATGGAGCTT ATTTTGAAGC GCTTTTAAAA CGCACTGATG GAGCGATAGA CGCTTTAAAA CATGAGATTT TTACCTTGTG TGATGCACAG TTCAATCTGA ACTCAACCCA GCAATTAGGC ACAGTGCTTT TTGAACAGCT AGGGCTTCCG CCTGTTAAAA AGACGAAGAC AGGTTATAGC ACGGATGAGA ACGTGCTCAA TGAACTTTTA GATAAACATC CCTCCATCGC AAAGATTTTG GAGTATCGAG AGCTTTATAA ATTACGTTCT ACCTACATTG AACCCCTTTT AAAACTCTCC AAAGAGTCTC CTTTGGGTCG AGTACACACC TCCTTTATCC AGACAGGAAC CTCCACCGGA AGACTTTCAT CAAAAGACCC AAATTTGCAA AACATTCCTG TCAAAACCGC TTTAGGTAGA GAGGTAAGAG GTGGTTTTGT GGCTAAAGAG GGATGTGTGC TGATAGGTAT TGATTATTCG CAGATTGAGC TGAGGCTTTT GGCACATTTT AGCAATGATG AAGCGATGGT TAAAGCGTTT AGAGATGGAA AAGATATTCA CTATGAAACC GCATTAAAAC TCTTTGGTGA GCAAGAAGCG GCTTCCAAAC GTAGTGTGGC AAAAAGTATT AACTTTGGGC TTTTATATGG GATGGGACCG AAGCGTTTAT CGGAGACGTT GGGGATTTCC ATGGCGGAGG CAAAGCGGTA TATTGAGAGT TATTTTGCGA CGTTTCCAAC GATTAAAGCG TATGTCATGG AAGTTGCAGA ACAGGCAAAA ACAACAGGAT ATGTTGAAAC CTTGTTGGGA CGTAAACGCT TTTTTGATTT TGAACACGCC AATGCGATGC AGTATGCAGG CTATTTACGT GAAGCGGTCA ATACCGTTTT TCAAGGCAGT GCCGCAGACC TTATTAAGCT TTCAATGAAT AAAATCATGG CGACCCTCAT TCATGATGAG GCAAAACTTT TGCTTCAAAT TCACGATGAG CTTATTTTTG AAGTGGTGGA GAGTCAAGCT CAAAGTTTCG CTTTAGAGGC TCAAAAAGTG ATGGAAGAGA TTTATGCACT TCGTATTCCA TTGAAAGTTT CGATTGCGAT GGGTAAGAAT TGGGGAGAGT TGAAGTGA
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Protein sequence | MKTLTIIDTF GFFFRNYYAL PQLRNSQGFP TGLLTGFANF IYAIKNEHDT DYVMFALDSK GKNFRHELDP NYKANRPEAP EELKKQLPVA ISWIEKMGFK CYSEEGFEAD DVIASAVKFA KRHGIKVRIV THDKDLYQLI DDGRVVIYDP MKKIEIDSEK CFEKFGVYPD KINEYLSLVG DTADNIPGVK GIGPKGAKKL LDDFGSVENI YANLERIANP RSKSMLEEGR ESAFLSKQLV RLDDSLNIAD TFEAFYFPCD NPLVNIADEL EKYELRHMLS RVRNEALHVK IKEAPSNTFR AILVDDAKIL FNVIEGIEEG SWVAFDTETN ALDAYNAKIV GFSFALNEHE AYYVPLAHHY LGVGEQIGME EAKEALKKLF KHKIVGQNLK YDLAVIENNF GLRLSSSYAD TMLMAWLLNP ESNVGLDTLA KRFFNHDMVK FKDVVSKNEN FSHVPLDKAC EYASEDAWMT LKLYNKLHDM LEPRLLEIAK EVEFPFILTL MRMEKEGIKI DGAYFEALLK RTDGAIDALK HEIFTLCDAQ FNLNSTQQLG TVLFEQLGLP PVKKTKTGYS TDENVLNELL DKHPSIAKIL EYRELYKLRS TYIEPLLKLS KESPLGRVHT SFIQTGTSTG RLSSKDPNLQ NIPVKTALGR EVRGGFVAKE GCVLIGIDYS QIELRLLAHF SNDEAMVKAF RDGKDIHYET ALKLFGEQEA ASKRSVAKSI NFGLLYGMGP KRLSETLGIS MAEAKRYIES YFATFPTIKA YVMEVAEQAK TTGYVETLLG RKRFFDFEHA NAMQYAGYLR EAVNTVFQGS AADLIKLSMN KIMATLIHDE AKLLLQIHDE LIFEVVESQA QSFALEAQKV MEEIYALRIP LKVSIAMGKN WGELK
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