| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_4457 |
|---|
| Symbol | |
|---|
| ID | 8605817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 5056598 |
|---|
| End bp | 5057965 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003302022 |
|---|
| Protein GI | 269128652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCTT TTTGTGAGGC AGGTGCAGCC ACCCGGCGGT GCCTTCCGCT CGTCCTGACC
GGGGCGCTGG CGATCGCCCA GCTCGGCGCC TGCGCCAAGA GGGACGAGCC CGAGGGAGTG
CGCCTGGGCA CGGTGACGCG CTCGGACGTG ACCGAGGTGA TCGAGGCGCC GGGCACGGTG
ACGGCACGGG CCACGGCGAC GCTGCGCGCC CCGGCCGAGG GCGTGCTCAA ACGGCTGCAC
GTGACCGACG GCGACCGGGT CCGCCGCGGC GAGATCCTCG CCGAGATCGA CTCGCCGCAG
GCCCGCGAGC GGCTCCGCCA GGCCCGCGAG GCCGACGCCG AACTGGCCGC CGGCACCCTC
CCGATGGGAC CGGAACCCTC GGCCTCCCAG CGGCGCAGCG ACCACATCGC CCGCCAGGGC
TTCCAGACCG CCCGGCGGGC GGCCGCCCAG ATCCCCGACC CCGGGCGGCG CGCCCGGATG
CTGGCCGAGA TCGCACAGAC CGAGGCCCAG TACGCCGCCG CCGCCGAAAG CGCCCGCGCC
GCCGTCGAAC GGCTCCACGC GGGCCTGGAG AACGTCACCT CGGCGATGCA GGCCGTCGCC
GCCGCCCAGC GCGTCCAGGC CCGGGCCGCG CTGCGGGCGG CCGAGCGCAC CGTGGCGGAG
CTGACCTTGC GGGCACCCTT CGACGGCGTC GTCTCCCTGG GCGGCCCGGC GGCCCCCGCC
GGGGACCTGG GCGAGCTGGC CGGCCGGCTG CCGCAGCGGC TCGGCGGCGG AGACGGCCTG
CAGGAGCTGG GCGGCGGCGC GTCCGCCGAG GCCGCCTCCG TGGCCGAGGG AGCCCCTGTG
ACCGCCGGCG GCGCGGTGGT GACGGTCACC GACGTCTCCC GCCTCACCGT CTCCGCCGAC
GTGGACGAGG CCGACGCGCT GAAAGTCGAG CCGGGCGTGC CGGCCGAGGT GGAGGTGGAC
GCCGTCCCGG GCGCCGCCTA CCCGGCCGAG GTCACCGGCG TCGGCGCCGG CCCGGCGCGC
TCGGCCGGCG GCGGCGTGAC CTACCGGGTC ACCCTCGTCC TGCGGCGCGG CCGGCTCACC
GACGGCGCCG AGGCGCCCTG GCCCAAGCCC GGGATGAGTG CCGTGGTGAA CCTGCGGGTC
CGCGAGGTCG CCGACACCGT CGCGGTGCCG TCCTCGGCGG TGCTGACCAG CGGCCGCGAC
AACGCGGTGT GGGTGGTCTC CGGCGGCCGG GCCCAGCGGC GGATCATCCG GATCGGCGCC
CAGGGCGAGA CCATGACCGA GGTCACCGCC GGGCTGCGGG TCGGCGAGCG GATCGTGGTG
CGCGGCGCCG GCGCCGTCGA GCAAGGGCAG GAGCTTCCCG GCCGATGA
|
|---|
| Protein sequence | MSAFCEAGAA TRRCLPLVLT GALAIAQLGA CAKRDEPEGV RLGTVTRSDV TEVIEAPGTV
TARATATLRA PAEGVLKRLH VTDGDRVRRG EILAEIDSPQ ARERLRQARE ADAELAAGTL
PMGPEPSASQ RRSDHIARQG FQTARRAAAQ IPDPGRRARM LAEIAQTEAQ YAAAAESARA
AVERLHAGLE NVTSAMQAVA AAQRVQARAA LRAAERTVAE LTLRAPFDGV VSLGGPAAPA
GDLGELAGRL PQRLGGGDGL QELGGGASAE AASVAEGAPV TAGGAVVTVT DVSRLTVSAD
VDEADALKVE PGVPAEVEVD AVPGAAYPAE VTGVGAGPAR SAGGGVTYRV TLVLRRGRLT
DGAEAPWPKP GMSAVVNLRV REVADTVAVP SSAVLTSGRD NAVWVVSGGR AQRRIIRIGA
QGETMTEVTA GLRVGERIVV RGAGAVEQGQ ELPGR
|
|---|
| |