| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3700 |
|---|
| Symbol | |
|---|
| ID | 8605051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | - |
|---|
| Start bp | 4251014 |
|---|
| End bp | 4252696 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Carotenoid oxygenase |
|---|
| Protein accession | YP_003301271 |
|---|
| Protein GI | 269127901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.101903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC CACGCTCGAT CCTCAGCCGG ACCGACTTTT CCGACTTCGA ACTGTCCCTG
ATCGCCGGAG CCTGGCCGCA GGACATCACC GGCCACTACG TGATCTGCAC CTCCGACCAG
CGCACCCGCC CGCTGCACGC CTTCTTCGGC GACGGCGTGG TGATCCGCCT GGAGCTGCGG
CCCGACGAGC GGGGGCGCTT CCCCTGGCGG GCGCGGGTCA TCGACACCCC CTCGGTCCGG
CTGCGGCGCA AGCGTCCCGA CCTGTTCACC GCCGGGCCGG TCGGCACCAG CTCGCCGTGG
GGATTCGTGA ACGCCGCCAA CACCGCGCCG CTGCCCTGGG GCGACCGGCT GCTGGCCACC
TGGGACGCCG GCCGCCCGGT CGAGATCGAC CCGCTCTCCC TGGAATTCGT GGCCGAAGTG
GGGCACCGCG ACGACTGGAA GCCGGCCATC GACCAGGCGG TGCTGCCGCT GATCTCCACC
ACCGCCCACC CGGTGATCGA CCCCGAACGG GGCTGCCTGT GGAGCGTCAG CCGGGACGTC
CTCACCGGCG AGGTCTCAGT GATCCGCTAC GACGGGCACG GCAAACACGT GCAGCGCTGG
GCGGTCGAGG ACGCCGTGCT GCCGCAGGCC ACCCACACCA TCACCCAGAC CCGCCACTGG
CTGGTGCTGG CCGACACCGC CTACAAGGTG GACCCCGAGG AGGTCTTCGG CGCCGAGCGC
ACCGTCGCCA ACAACCCCGA CGGCCCGGTG CTGCTGATCC GCAAGGACGA CCTGGTGCCC
GGGCGCGCCG GCGTGCCCTG CCGCACCTTC CGCATCGCCC CCGAGGTCAA CCACTTCTAC
GCCCGCTACG ACGACACCGA CGGCGTCCAG GTGATCATGG AGCACTCCCC GGGCCTGGAC
ATCGGCATGT ACCTGCGCGA AGACGACCTG GACGCCTTCG GCCGCCCCAT CGACCCGGCG
CTGCGCGGCA TGTACTGCCA CGGCATGTCC CCGGCGCTGA CCACGCTGCT GCGCTTCGAC
CCCGAGACCG GGCGGGTGCA CGAGCGGGCC CGCCTGTTCG ACCCCGAGCG CTACTGGCAG
GCCGAGCTGT CGGCGATCGA CTGGAGCTTT GAGGGGCAGA CCAACCCCAC CCGGCACCAC
CTCATCCACC TGGGCTTCCA CCCGGAGGCC ATCAACCAGC GGGCGCTGAA GAACTACGAG
GGGCGGGTGA ACCCCGAGCT GTTCCCCGCC GAGGAGACCC CGGCGGTGCT CAGCAGCCTC
GACTGGCACA CCCTCCGGCC GGTGGCCGAG TGGACCTTCG CGCTGGAGGA CTACCCGACC
TCCCCGGTGT TCGTGCCGCG CGGCCCGGGC GCGCCGGGCC GGACCCGCTA TGCCGGGGCC
GACCCGGGCG GCCACGACGG CTACCTGCTG GTCGCGGTGC ACAACGACGA CCGCTTCCGG
ATCGAGCTGT TCGACGCCGC CGACGTCTCG CGCGGCCCGA TCGCCGTGCT GGCCGCACCG
CAGGGCACCA CCGTCCCCTT CCTGATCCAC TCGGCGTGGA TGCCGCAGGC GCGGCCCGCC
GACCCGGGCA TAGAGCGGCT GCGCTTCGCC GACGACCTGG ACTCCCGGCT GGACCAGCTG
GACCCGGAGC TGGCCGCACT GACCCGCCAG GTGGCCGAGG AGCTGGACGC CCGCCACCGC
TGA
|
|---|
| Protein sequence | MPIPRSILSR TDFSDFELSL IAGAWPQDIT GHYVICTSDQ RTRPLHAFFG DGVVIRLELR
PDERGRFPWR ARVIDTPSVR LRRKRPDLFT AGPVGTSSPW GFVNAANTAP LPWGDRLLAT
WDAGRPVEID PLSLEFVAEV GHRDDWKPAI DQAVLPLIST TAHPVIDPER GCLWSVSRDV
LTGEVSVIRY DGHGKHVQRW AVEDAVLPQA THTITQTRHW LVLADTAYKV DPEEVFGAER
TVANNPDGPV LLIRKDDLVP GRAGVPCRTF RIAPEVNHFY ARYDDTDGVQ VIMEHSPGLD
IGMYLREDDL DAFGRPIDPA LRGMYCHGMS PALTTLLRFD PETGRVHERA RLFDPERYWQ
AELSAIDWSF EGQTNPTRHH LIHLGFHPEA INQRALKNYE GRVNPELFPA EETPAVLSSL
DWHTLRPVAE WTFALEDYPT SPVFVPRGPG APGRTRYAGA DPGGHDGYLL VAVHNDDRFR
IELFDAADVS RGPIAVLAAP QGTTVPFLIH SAWMPQARPA DPGIERLRFA DDLDSRLDQL
DPELAALTRQ VAEELDARHR
|
|---|
| |