| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcur_3166 |
|---|
| Symbol | |
|---|
| ID | 8604511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermomonospora curvata DSM 43183 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013510 |
|---|
| Strand | + |
|---|
| Start bp | 3663026 |
|---|
| End bp | 3664297 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
|---|
| Protein accession | YP_003300745 |
|---|
| Protein GI | 269127375 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0130839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA CCCTTCGCTC GGCGGCCGTG TCGCTGGTTG CGCTGGCGCT GGCCGCCACC
GCAGCCGGCT GCTCCAGCGA CAAGGCCACC GGTGGCTCCG AGGCGACCGG GCCCGACGGC
GTCAAGCAGG GCCCCGGCGT GACCGACAAG ACCATCAAGC TCGGCATCGC CACCGACCTG
ACCGGCGTGT ACGCGCCGCT GGGCAAGAGC ATCACCCAGG CCCAGCAGCT GTACTACGAG
GAGGTCAACC AGCGCGGCGG CGTCTGCGGC CGCACCATCG AGGCCGTGGT GCGCGACCAC
GGCTACGACC CGCAGAAGGC GGTGTCCATC TACACCGAGC TGAACAACAA CGTGCTGGCG
ATCCCGCACT TCCTCGGCTC GCCGATGGTC AGCGCGGTCA AGCAGCGCAT CGAGTCCGAC
AAGATGTTCA CCATCCCCAG CGCCTGGACC ACCGCGCTGC TGGGCAGCAA GTACATCCAG
GTCACCGGCA CCACCTACGA CGTGGACATG ATCAACGGTG TCCAGTGGCT GATGGACAAG
AAGCTGATCA AGAAGGGCGA CAAGCTCGGC CACGTCTACT TCGAGGGCGA CTACGGCGGC
TCGGCGCTGC GCGGCACCAA GTACGCCGCC GAGCAGCTGG GGCTGGAGGT CTTCGAGCTG
CCCATCAAGC CCACCGACCG TGACATGAAG TCGCAGGTCG CGGCGCTGGC CAAGGAGAAG
GTCGACGCGA TCCTGCTCAG CGCCGGCCCG CAGCAGGCGG CCTCGCTGGC CGGCATCGCC
CGCTCCCAGG GCATGAAGCA GCCGATCCTG GGCAGCAACT CCGCCTACTC CCCGCAGCTG
CTGGCCACCC CGGCCAAGCC CGCTCTGGTG GAGGGCTTCT TCATCGCCAC CGCCGGCGCC
CCGATGAGCG CCGACCTGCC GGCGATCAAG AAGCTGGCCG AGGCCTACTC CAAGAAGTAC
CCCAAGGACC CGCTGGACAG CGGTGTGGTC AACGGTTACG GCGGCGCCTC CATCGTGGTG
TCGGCGCTGG AGAAGGCCTG CGCCAACAAG GACCTGACCC GGGAGGGCCT GATCAACGCC
CACCGCTCGG AGGCCAACGC CGACGACGGG CTGGGCACCC CGATGAACTT CACCTACTTC
GACAAGCCGG CCACCCGCAA GACCTACATC ATCAAGCCGG ACGAGAAGGC CACCGGCGGC
GCGGTGATCG TCGAGCAGGC CTTCGAGTCG GAGCTGGCCA AGAACTACCA GGTCCCGGTC
GGCACCTTCT GA
|
|---|
| Protein sequence | MKSTLRSAAV SLVALALAAT AAGCSSDKAT GGSEATGPDG VKQGPGVTDK TIKLGIATDL
TGVYAPLGKS ITQAQQLYYE EVNQRGGVCG RTIEAVVRDH GYDPQKAVSI YTELNNNVLA
IPHFLGSPMV SAVKQRIESD KMFTIPSAWT TALLGSKYIQ VTGTTYDVDM INGVQWLMDK
KLIKKGDKLG HVYFEGDYGG SALRGTKYAA EQLGLEVFEL PIKPTDRDMK SQVAALAKEK
VDAILLSAGP QQAASLAGIA RSQGMKQPIL GSNSAYSPQL LATPAKPALV EGFFIATAGA
PMSADLPAIK KLAEAYSKKY PKDPLDSGVV NGYGGASIVV SALEKACANK DLTREGLINA
HRSEANADDG LGTPMNFTYF DKPATRKTYI IKPDEKATGG AVIVEQAFES ELAKNYQVPV
GTF
|
|---|
| |