Gene Rmar_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2906 
Symbol 
ID8569568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp108923 
End bp113515 
Gene Length4593 bp 
Protein Length1530 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003292152 
Protein GI268318434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACA TTGACTTTAA AAATATTCGC CAACTGAATG GCTCCCAGAA CTACGCTTTC 
GAGGAACTTT GTGCCCAGCT TGCAAGGGCA GAAATCCCCT CGGACGCGAA GTTTTATAGG
AAGGCACCTC CAGATGCGGG GATAGAGTGC TACGCAGCTC TTCCAAACGG TGACCTATGG
GGCTGGCAAG CTAAATACTT ACATACATTG GGACACTCGC AATGGCGTCA GATTGATAAA
TCGGTAAGAA CTGCCCTTGA AAAGCATCCA AGACTCGTTC GCTACTACAT CTGCGCTCCG
CTTGACCGTA CACATGCTCA ACTCGAAAAG TGGGAGAATC GTGTAGAGGA ATGGCAGAAT
CTGGCTTCTG ATAAAGGAAT GACGGTAGAT TTTATCTGGT GGGGGAGGCA TGAACTCTTA
GCCTTGTTAG AGCGGCCGGA ACATGCGGGC AAAGTTAGAT TTTTCTTCAA CGTAGAGCGT
TTCGATATAG AATGGTTTAA AGCCCGACTG GACGAAGCAA TAAACTCAGC AGGCCCACGA
TACACCCCTA AGATTCACGT CGAGCTTCCC ATCGTTCACG AGTTTGACGC TCTTGGACGA
ACGCAACGGT TTTTCGACAG CATTAAAAGC CAAATACCAG AGCTTCGTAG GGAGATACAG
CACATAGACT ACATAATCTC CCACCTTTCT GATAAGACCT GGGATGACAT TGCTCCTTCA
ATATTGCAGG TAACACGAAG CATCCAGCCA ATCCTCGCAG CTCTTAGCAA CACCTCTCCC
GATCCGGCCG GACCTCTACC ACTTGGCCAG CTCGCAGAAC AGGCCTCTCA GTTAGCCATC
AAGGCAGATA ACATTGCAAA TACACTTGGG AACTACAAGA AAGATTTTGA GCCTCGAAGA
GAAAAATCAG GCGAAAGCAG AGACAAAACT GTTTACCACG AAAATCCTGT CAGAAACCTG
AGAGACAACT TTTGGGGCTT AAGAAATAGA CTTCAGGAGT TAGAGGGATT TCTTAAGCAC
GCTGACCAGG TAGCGAATGC CTCTCTACTG ATCCTTACCG GTGATGCGGG CACTGGAAAA
ACTCACCTGC TCTGCGATGT TGCGAAGAAA CGGCTTGAGG AGGGCAGACC CACTGTGCTC
CTGATGGGGC AGCGATTTAC CAGTACAGAT GAACCCTGGA CACAGGCTCT CCAGCAATTA
GATCTTCGCG ACCTACAGGC AGAGGAGTTC ATTGGTGCCT TAGAAGCGGC GGCGCAGGCA
GCGGGATGCC GTGCATTACT CATTATTGAC GCCTTGAACG AGGGAATGGG GCGCCACCTC
TGGCCAAATC ATCTGGCTGC TTTCCTGACA CGCCTTGAGC GCTCGCCCTG GATCGGGGTT
GTCCTTTCCG TGCGTTCGTC TTACGAAGAG GTCGTCATCC CTGAGGAAAT TCGGAAAAGG
GCGGTTCGGA TCATTCACGT TGGATTTGCA GAACATGAAT ATGATGCCGT TAGGACTTTC
TTCACTCATT TTGGTCTTGA GCTCCCATCA GCACCCATCT TGATCCCTGA GTTTAGCAAT
CCTCTATTCT TGAAGATGCT GTGCAGTGGA CTACAAGAAA AAGGAAAGCG TCGTATGCCG
CGGGGATTCC ATGGTATCAC GAAGTTGTAC GAATTATTCC TGGATGCGGC TAACAGTCGA
TTGGCACGAG AACTTGATTT TGATCCAGGA GACAGGCTCG TGCACAAGGC TTTGGACAAA
TTATCAGAAA CACTTGCTCA GCAGGAGCAA CGATTTTTGC CGAGAGAGAA TGCTAAAGTT
CTCATAAACT CCCTGCTTCC CGGTCGTGAT TTCAGCCGCT CACTGTTTCG TGGTTTGATC
GTCGAAGGAC TTTTGATCGA AGAGATGTTG GAAATCAACG GTCAGCGCGA AGACGTTGTC
TTGATAGCGT ATGAGCGCCT CGCTGACCAC CTTATCGTGA AACATCTCCT CGACAAGTAT
CTAGATGCTG AAGCTCCCGC AAGGGCGTTC CAAAAGGGTG GACCACTTGG CTTTCTCCAG
GATCCCTCTC GTCATGTGCC TCTTGGACTT CTTGAAGCGC TTTGTATTCA AGTTTCTGAA
CGCACAGGGA AAGAAATCTT GGAACTTGCT CCATCGCTCA AGGGACAAGG GTGGCCTGTT
GGACATGCAT TTCGGCAAAG TCTGATCTGG CGTGACAAGG GGGCATTTTC AGATACTACG
CAAAAAATCC TGCGAGAGCT AATCAAAACC GAAGACGAGC TGCACGAGAC TCTTGACGTA
CTCCTGACGA TCGCCATTTT GCCTGAGCAT CCACTTAACG CGGCTTTCCT CGACAAAGTC
CTCCGCAAGT ACTCAATGCC CGACCGGGAT ACCTGGTGGA GCACCTACCT CCATTACGCC
TATTCAAGCG ACTATCCTGC AGCGGTTCAC AGTCTTCTCG ATTGGGTATT AGCCATCAAG
CCGAATCAGG CGCTCGAAGA TGATGTCATT GACCTCTGTT CAACGACACT GGCGTGGATG
TTGACAACAT CGAATCGTTT CTTGCGTGAC CGAGCGACTA AGGCTCTGGT GAACTTGTTG
ACGGGTCGGC TTGATGCTGC TGTGAGACTT GTCGAGCGGT TCGCGAACGT TGACGATCCT
TATGTTAGCG AGCGAATTTA TGCGGTCGCC TATGGAATAG CTATGCGAAG TCACGATGCA
GACAAGGTTG GAGAGCTGGC ACAGTGCGTT TACGATAAAG TGTTTGCAAA TGGTAAACCT
CCCGCTCACA TCCTCCTGCG CGATTACGCC CGAGGTGTCG TTGAGCGCGC TCTGCATCTG
GGTGCAAAGG TTAACATTGA CGAGACAAAA ATCCGGCCTC CGTATCAGAG TGACTGGCCT
CACATTCCCA CAGAAGAAGA AATCAAGCCG TATCTACCGG ATTGGTCTCG TGGCTCCTAT
GATAGTGGAG ATCTTGAATG GGCACGCAAC CGAATTGCCC GTTCTGTTTT AGAAGATGAC
TTTGCCCGGT ATGTTATCGG GACAAACTCG GGCCGCATAA ACTGGCTTTC GCTCAGACTT
GATGAACCTG TCTGGCAATC TCCGGATGAG CGTTTGTCTG CCCTTGTTGC TGAATTTTCT
GAAGAGGAAA AGAAGGTTTG GCAAGCTTTT GAAGCCGCAG ACCATGCTCT CGGAGAAGCC
AGCTTACTAT TCAGCACCAT CATCCAGAAG TTCAAGAATG GAGAAAGGGC CGATACCCAT
GACCTTGCAA ATCTATCTGA TGAAGGGGGG CCAGAAACCT TTCCCCCACA TATTCAGGAG
TTGCAGCGCC AACGAGAGGC TGCCTTGAAT GAATTGAGGA CAGCTCTCAC AAAAAGCCAT
TTACAACGAC TCAAGGAATT TCTTTCAGCA AAGGAAAGAG GGGAAGCCCC ACCCCACTTT
GATTTACAGT TGATTCAGCG TTATGTGCTT AAGCGTGTGT TCGACCTCGG GTGGACAATT
GAGCGCTTTG GATATTTTGA CTGCTTTGCG ATTGGCTATC ATGGTCATGC AGCAGGGAAA
GCAGAGCGTA TCGGCAAGAA GTATCAGTGG ATCGCGTATC ACGAGATCAT GGCCTACATC
GCTGACCACT TCCAGTATCA CAATCTTGCA GGCGATCGTT TGTACAAAGG GCCCTGGCAA
GAAAGGCTGC GTGACATTGA TCCATCCTGC ACGCTCAGTA AAAAGCCCGG TGGAACTTCT
TTAGATGGGC ATTCACCGGC TTGGTGGTGT TCGGTCGAAT ATAACAATTG GGAAGGAACA
GAAGATTATT GTGAATGGGC CAAAAGACAT GATGATTTGC CACGAGTAGA AGATCTTTTC
GTCGTAACGT GTCCCAAGGA TGGTTCACGA TGGGTGAATC TACAGGGATT TTTCCTTTGG
CAACAGAAGA CCTCACCAGA CCAAGACTTT GGCGAATCCG AGCAGCGAGA ACTGTGGTAT
ATGTGCACAG GTTACTTTCT TCGGAAGGAG GATGCCGAAG CATTTATAAA CTGGGCTAAA
AACGTAGACT TCTGGGGACG ATGGATGCCA GAGCCTCCTA AAATCTATGA AATGTTTGTC
GGTGAATACG CATGGGCACC GGCATTCCGT TATTTTCAGC AGCCGTACTA TGGTGATACC
GGATGGTCAC ACCCTCGTGA AGATTGTCCG GTAAAGCTGA GGGTGGCATC GTTTAACTAC
GTGGCTGAAT CTGGTGGTTT TGATTGCTCC ATTGACGAGA GCTATACAAT CCGACTACCA
GCGGTTGACC TTGTGGATGG ACTGAGGCTC CGGTGGACTG GAGACGGGGG AGACTTTGTC
GACACATCGG GACAACTCGT AGTATTTGAC CCCACTGTTC ATGAAGCAGG CCCTGATGCC
CTTCTAGTGC GGTTCAATGA ACTAGTGCGT TTCTTAGAGC AAAAAGAGCT TACTTTATGC
TGGGTCGTGA TCGGGGAGAA AAGAGTTGTT GGTCCGGGGT TTCCTCCGGA TTATTATGCG
TCATTGCGAA TGTCTGGCGC CTATAGGCTC TGCCAAGAGA GCTCTAAGGG GTTTCTTAAA
CGCTCCTTGG AAGTAAGTGA TGCTATGTCT TAA
 
Protein sequence
MLNIDFKNIR QLNGSQNYAF EELCAQLARA EIPSDAKFYR KAPPDAGIEC YAALPNGDLW 
GWQAKYLHTL GHSQWRQIDK SVRTALEKHP RLVRYYICAP LDRTHAQLEK WENRVEEWQN
LASDKGMTVD FIWWGRHELL ALLERPEHAG KVRFFFNVER FDIEWFKARL DEAINSAGPR
YTPKIHVELP IVHEFDALGR TQRFFDSIKS QIPELRREIQ HIDYIISHLS DKTWDDIAPS
ILQVTRSIQP ILAALSNTSP DPAGPLPLGQ LAEQASQLAI KADNIANTLG NYKKDFEPRR
EKSGESRDKT VYHENPVRNL RDNFWGLRNR LQELEGFLKH ADQVANASLL ILTGDAGTGK
THLLCDVAKK RLEEGRPTVL LMGQRFTSTD EPWTQALQQL DLRDLQAEEF IGALEAAAQA
AGCRALLIID ALNEGMGRHL WPNHLAAFLT RLERSPWIGV VLSVRSSYEE VVIPEEIRKR
AVRIIHVGFA EHEYDAVRTF FTHFGLELPS APILIPEFSN PLFLKMLCSG LQEKGKRRMP
RGFHGITKLY ELFLDAANSR LARELDFDPG DRLVHKALDK LSETLAQQEQ RFLPRENAKV
LINSLLPGRD FSRSLFRGLI VEGLLIEEML EINGQREDVV LIAYERLADH LIVKHLLDKY
LDAEAPARAF QKGGPLGFLQ DPSRHVPLGL LEALCIQVSE RTGKEILELA PSLKGQGWPV
GHAFRQSLIW RDKGAFSDTT QKILRELIKT EDELHETLDV LLTIAILPEH PLNAAFLDKV
LRKYSMPDRD TWWSTYLHYA YSSDYPAAVH SLLDWVLAIK PNQALEDDVI DLCSTTLAWM
LTTSNRFLRD RATKALVNLL TGRLDAAVRL VERFANVDDP YVSERIYAVA YGIAMRSHDA
DKVGELAQCV YDKVFANGKP PAHILLRDYA RGVVERALHL GAKVNIDETK IRPPYQSDWP
HIPTEEEIKP YLPDWSRGSY DSGDLEWARN RIARSVLEDD FARYVIGTNS GRINWLSLRL
DEPVWQSPDE RLSALVAEFS EEEKKVWQAF EAADHALGEA SLLFSTIIQK FKNGERADTH
DLANLSDEGG PETFPPHIQE LQRQREAALN ELRTALTKSH LQRLKEFLSA KERGEAPPHF
DLQLIQRYVL KRVFDLGWTI ERFGYFDCFA IGYHGHAAGK AERIGKKYQW IAYHEIMAYI
ADHFQYHNLA GDRLYKGPWQ ERLRDIDPSC TLSKKPGGTS LDGHSPAWWC SVEYNNWEGT
EDYCEWAKRH DDLPRVEDLF VVTCPKDGSR WVNLQGFFLW QQKTSPDQDF GESEQRELWY
MCTGYFLRKE DAEAFINWAK NVDFWGRWMP EPPKIYEMFV GEYAWAPAFR YFQQPYYGDT
GWSHPREDCP VKLRVASFNY VAESGGFDCS IDESYTIRLP AVDLVDGLRL RWTGDGGDFV
DTSGQLVVFD PTVHEAGPDA LLVRFNELVR FLEQKELTLC WVVIGEKRVV GPGFPPDYYA
SLRMSGAYRL CQESSKGFLK RSLEVSDAMS