| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2858 |
|---|
| Symbol | |
|---|
| ID | 8569529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013502 |
|---|
| Strand | - |
|---|
| Start bp | 67672 |
|---|
| End bp | 68802 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003292113 |
|---|
| Protein GI | 268318395 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.551858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACAA CGTTCAAATA TCGCCTCTAT CGATCCAAGC GGGATAAGCA CCTGATCGAG
CAGATCGAGG TGGCCGCCTC CATCTGGAAC CACTCCGTGG CGCTGACGCG ACGCTACTAC
CGGATCTACG GGAAATACCC CGGGGCAAAC CGGCTGATGA AGCACATCGC CAGACTCCGC
CGGCGCAACC CCTACTGGCA AAAGCTCGGG TCACAGGCCG TGCAGGACGT GATCCAGCGA
CTCGACAGGG CCTACTGGCG GTTCTTCTCT GACCCGAAGG CCGGAAGGCC CCGCTTCAAG
AAGCGCGAGC GGTATTCCTC GTTTACTCTG AAACAGGCCG GGTGGAAGTA CCCTGGAGGT
AATCGGATTC GCATTGGCAA GCACAACTAC AAGTTCGTGC TCTCCCGCCC GATTCAAGGC
GAAATCAAGA CCGTCACGAT CAAGCGGGAC CGTGTAGGGC GACTCTGGAT CTGTTTCAGT
GTGGTCACAG AGGAACAGCC GAAGCCTCCA GCCCCACACG AGGCGGTAAT GCGCCCGGTG
GGGCTGGACT TCGGCCTGAA GTGCTTCCTC ACACTGAGCG ACGGCACTAA GATCCAGTCG
CCCGAGTTCT TCCGTCGCGG TCTGCAGGAG GTGAGAAAGG CCCACCGCGC GCTCAGCCGC
AAGCAGCGGG GATCGAACAA CTACCGCAAA GCCCGTGTCC GTCTTGCGAA GGTCTATGAC
CGGATAAGCA ACCAGCGTCG GGACTGGTTC TTCAAGACGG CCCATGCGCT CTGCGAGCGC
TACGACTTCA TTGCCCTTGA GGATCTGAAC ATTGAGGGCA TGAAGCGGAG GTGGGGAAGG
AAGGTCAGTG ATCTCGGCTT TGGGGAGTTC GTGTCGATCC TTGAGCATGT TGCTCGGAAG
CGGGGCGTTC GTGTTGCGAA GGTAGCCCGT TTCTTTCCGA GCAGCAGGAG GTGTTCCTGT
TGTGGTTGGG TTAAGGAGAA CCTCAGTCTT GCAGATCGCG AGTGGACGTG CGAGCGGTGC
GGCACCGTGC ACGACCGTGA TGAGAATGCG GCGATAAACA TTTGCAGGGA AGGGGCATCT
TTCCTTGGGG TAGGCGACGT AAGACCGCCT GAGGCGGCTG TCGCTGTCTG A
|
|---|
| Protein sequence | MRTTFKYRLY RSKRDKHLIE QIEVAASIWN HSVALTRRYY RIYGKYPGAN RLMKHIARLR
RRNPYWQKLG SQAVQDVIQR LDRAYWRFFS DPKAGRPRFK KRERYSSFTL KQAGWKYPGG
NRIRIGKHNY KFVLSRPIQG EIKTVTIKRD RVGRLWICFS VVTEEQPKPP APHEAVMRPV
GLDFGLKCFL TLSDGTKIQS PEFFRRGLQE VRKAHRALSR KQRGSNNYRK ARVRLAKVYD
RISNQRRDWF FKTAHALCER YDFIALEDLN IEGMKRRWGR KVSDLGFGEF VSILEHVARK
RGVRVAKVAR FFPSSRRCSC CGWVKENLSL ADREWTCERC GTVHDRDENA AINICREGAS
FLGVGDVRPP EAAVAV
|
|---|
| |