| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2856 |
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| Symbol | |
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| ID | 8569527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013502 |
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| Strand | - |
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| Start bp | 61891 |
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| End bp | 65622 |
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| Gene Length | 3732 bp |
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| Protein Length | 1243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003292111 |
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| Protein GI | 268318393 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCT ACTGGTATTC GGCAGCGGCG CGTCTCGGGT TGTGGGACAC TCTGCCCGAA
GCGCAACAGG GGCTGGTCAA TAACCTCTAC AGACGACTTC GATTCTATGC CCACGCGGTC
CTGGAGGGCT ACGAAGCATT TGCTTTCGAC AAGACGGAGT CCGAGTCTCT GAGTTCGCTT
CTGGCCGTTA TCGACAAACT GACGATTCGA GGGTGCCCGA CGCTGGTTGA TCTCGACCTG
GAGACGGCCT TACTCGAAGG CCCCTGCCGC CAATTCGTCG ATGCAGTCCC GATTGAAGAT
GGTCCGGTTG TGGGATGGAA ATTCAGACGG TTCCTGTTGC CCGTGCAGTT TTCGGATCTG
ATCCGGGCCA CGGTCGAATT GCTCGAATTA CCGTTCAGCT CCAACGGTAA GGATGGAACG
GACGACCTGG CATATCCGGT GATAACGCCA GAGCTGGAGG CATTGAGCAG CGAGGAGGAG
CATCTGTTTA TCGAGCAGTT TGCGAGCGTT TTTGGGTCGC ACCTGTTGCG TAAACTGCGC
AGGCAGGTTC CGTTGCAGGA TCTCGTGCCT TATGAGCTTG AGGAGCCCTT CGTTCGCCAG
CGCGTCGATT TTGCCCTGCA GATCGGACGG TTGCGATACG TTTTCGAAAT CGATGGCAGA
CAACATCTGG AGCCGGGGCA GCGCCGTCTG GATGATCAGC GAGATCAGTT GCTGAAAAAC
GCCGGCTGGC AGGTGATTCG TATTCCGGTC GAAGTCGTGC GTCAGGGGAG GGGTTCTCAA
CTGCAGACGC TACATGACAG GCTGCGCGAA GCGCAGCTCG AAGGGCTGGA GCAGATCGGC
CGGACGAGTG TGCTGGACCT GGTGGCCAGC TCGGATCTTT ACCGCGCCGC GCTCTACGGC
TGGATTTATC CGCTGGCGGT GCATCGCTGC CTGCGCGGGC TTGCTTTCCT GTACCGGTTC
GGTTATCTGG ATGCAGGCAG GCCGCAACGT GTGCTGGTCA TTGAAGAGGA TATTCCGGTG
GTGGCCAGTG CGTTTCGCAT TCTGCATACC TACTGGGACC ATCTCCGAGC GCTGGCTCCG
GAGGTGCCGC CTCCACCGAC GCTTGAAGTT GACGTGATCG GATGCGACGA GATTGAAATT
CTGGCGCCCG TTGAAGGCAC GCGGCGCGTT ACGGCTCCTT CGGGCTCATA CGACCTGGTG
CTGGACCACA GTTTCTGGCT GTATGACGGG TCAGAGGGAC CGCTGGAAAA AGAATTACAG
CCGCTGCCTC CCGGGCGTTA TGTGCGTCTG CGTCGGGCTT TCGGCCTGCG CGAAGAGCGG
TCTCTGACCT GGTCGGCGGC CCTGCACTAC GATCTGGGCG ATCTTGAACG GGCCCTGATT
GCCGAGGCCG AGGGGCGCCC TGCAGAAATG CCCGAACGTA AAGTGGCTGC CTTGCGGTTT
TTCCTGCAGC AGATTTTCCG GAAGCGAGAT TTCTGGGAGG GGCAGCTTCG CGTCATTGCC
CGGCTTCTCC AGGGGCGTCC CACGGTGGTT CTGCTGCCGA CAGGCGGCGG TAAATCGCTG
ACCTATCAGT ACAGCGGGAT GCTGCTGCCG GGCATGACCA TCGTCGTCGA TCCCCTCATT
TCTCTGATGA TCGACCAGGT CGATAATCTC AGAGGATTTG CCATAGATAT GGTGGCCTCT
ATCTCTTCAA TCATCGACAC AGAAGCGCGT GAGCGCATTA TTGCACAGAT GGGGGCCGGT
AAGCTCGCGT ATGTTTTCAT CTCGCCGGAG CGCCTTCAGA GCGACGATTT CCGGCAGAAG
TTGCAGGATG TGGCCGCTCG ACTTCCCATC TCGCTCGCGG TTGTCGATGA AGCACACTGC
GTTTCCGAAT GGGGCCACGA CTTTCGTCCG TCTTATCTGC ACATGACGCA CAACCTTCAG
AAATTCTGCG CTTCAGCTGC TTCCAGACCA ACCCTTGTTG CCCTGACGGG TACCGCTTCG
TTTGCCGTGC TGACCGATAT TCAGGCCGAA CTGGGAATCA CCGACGAAAG TGCCATTGTG
CTTCCCAGGT CGTTCGATCG TAAGGAAATC CGCTTTCACG TGGAGCGGGT GCCTCGCGAA
GCAAAAATGC ACGCTCTTAA GCGCTTTCGC AGTCAGCTTC CATATCTGCT CCGGGTCAAT
CCTCAACGCT TCTTTGATCT CAGTGGCGCC GAGACGAATT GCGGTATTGT GTTCTGTCCT
CACGTAAATG GAGAACTCGG TGTCTGGGAA GTGGCGCTTG AGCTTGGCCA CGGAAAGTGC
TACGCCGGCA AACAACCCAG AAGCTTTAAC GAGCAACGGC ACGGTAAATG GCGTGACTTC
AAGTTGAAGG TTCAGAAGGA TTTCAAGCAC AACAGAATCC AGGAGATCGT CGCAACCAAG
TCGTTCGGAA TGGGCATTGA CAAACCCAAC ATTCGCTACA CCATACACAT CTGCATTCCA
CATTCGGTCG AGGCCTTCTA TCAGGAAGCA GGTCGTGCGG GCCGCAACGG AAAGCCGGGC
TATGCAATTT CGGCCATTCT GTACAGCGAC GAGAACTGGG TGGAGGCAAT GGGGATCTTC
AACGAAGCCG ATCACCGGAA GGCCCAGAAA AAGATCGAAA ACATTCCGTG GAATAGCCGT
GGCGATTTGC TCATTCAGCT GTGGCTGCTG TATAACACCT ACCGGGGGCG CGACGACGAG
TATCAGCGAG CGCTTGACTT CTGGAAGAGG TATGTGCGCC CGGAGCTGAA GGAGCTACCC
GTAGGCGCCA CGCGGCTGTT GGAGATTCCA TTTACCCAAT CCCGAAGGGT TGACGACGAG
GAGGAAGAGA CTAACAGGGG GGCGCTTGAG AAGTCCATCT TCCGGATGGT TATTCTGAGG
ATCGTGGAAG ACTACACGAT TGACTGGAAT CAGAGCATTT TCCAGTTGCG CGTGCGCAAT
GCCGCTCCGA TAGAGATAAA GCAATCGCTT CGCAACTATC TGGGGCGCTA TAAACTGCCG
GCCACGGCCG ATCAGATGGT TCAACCGATT CCGGAGGATG ACCAGGAAAA GGCCCTGGAG
GCAGCACTCG AAGTGTTGAT CGATTTTGTC TATGGTGAAA TAGCCGCCAA GCGGAAACAG
GCTCTGCGCA CGATGGCGGA GCTCTGTCGC AACTTCAGAT CCGACAGGGA TTTCAGAGAG
GCCATTCTCG CCTACCTGCA GGAGTCGGAA TTTTCCGCGG AGTTGCGCAC CTGGATCGGG
CGCGGTTTTG ATGAGATCGG CCTTGAAAAG ATTCGCGATT TGCTCGGAAA ACTCTCTTCG
CTGGACGAGA TCAAAAGGCT TGTGGGTACG ACTCGACGTA TGCTGGATGA GGATCCGGGC
AACGTGCCGC TTCGCTATCT TTCCGCAGTG GCCCGGGCGT TGAGTCGGGT GGAAAGCGAG
GAAAGCGTGC TGGAGGAGGT CGTGTCGCTG ACGCTTCAGA TCCTTCGGCT GAAGGATCGA
CTGAGAGATC CAGACGAAAT ACTCGCGGCA CTGCTGGGAG ATCTTGCGAC CGCTCGTCCC
GAACTGCTGG CCAGGGCCGC CGACAGGGTG CTTCGGCTGT TCGGGACTCC TGCCCTGGCC
CGCAGACTTC TGCAGGGACC TGCAGGGTCT GATGCGGTTG TGCGTAACCA CGCGGCCGTA
TTGCTCATGG CAGAATCCCT GCGTACGATC AGAGAATCCG CGTTTTATCA GACCCTTGTT
AATGCAGTAT GA
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| Protein sequence | MDRYWYSAAA RLGLWDTLPE AQQGLVNNLY RRLRFYAHAV LEGYEAFAFD KTESESLSSL
LAVIDKLTIR GCPTLVDLDL ETALLEGPCR QFVDAVPIED GPVVGWKFRR FLLPVQFSDL
IRATVELLEL PFSSNGKDGT DDLAYPVITP ELEALSSEEE HLFIEQFASV FGSHLLRKLR
RQVPLQDLVP YELEEPFVRQ RVDFALQIGR LRYVFEIDGR QHLEPGQRRL DDQRDQLLKN
AGWQVIRIPV EVVRQGRGSQ LQTLHDRLRE AQLEGLEQIG RTSVLDLVAS SDLYRAALYG
WIYPLAVHRC LRGLAFLYRF GYLDAGRPQR VLVIEEDIPV VASAFRILHT YWDHLRALAP
EVPPPPTLEV DVIGCDEIEI LAPVEGTRRV TAPSGSYDLV LDHSFWLYDG SEGPLEKELQ
PLPPGRYVRL RRAFGLREER SLTWSAALHY DLGDLERALI AEAEGRPAEM PERKVAALRF
FLQQIFRKRD FWEGQLRVIA RLLQGRPTVV LLPTGGGKSL TYQYSGMLLP GMTIVVDPLI
SLMIDQVDNL RGFAIDMVAS ISSIIDTEAR ERIIAQMGAG KLAYVFISPE RLQSDDFRQK
LQDVAARLPI SLAVVDEAHC VSEWGHDFRP SYLHMTHNLQ KFCASAASRP TLVALTGTAS
FAVLTDIQAE LGITDESAIV LPRSFDRKEI RFHVERVPRE AKMHALKRFR SQLPYLLRVN
PQRFFDLSGA ETNCGIVFCP HVNGELGVWE VALELGHGKC YAGKQPRSFN EQRHGKWRDF
KLKVQKDFKH NRIQEIVATK SFGMGIDKPN IRYTIHICIP HSVEAFYQEA GRAGRNGKPG
YAISAILYSD ENWVEAMGIF NEADHRKAQK KIENIPWNSR GDLLIQLWLL YNTYRGRDDE
YQRALDFWKR YVRPELKELP VGATRLLEIP FTQSRRVDDE EEETNRGALE KSIFRMVILR
IVEDYTIDWN QSIFQLRVRN AAPIEIKQSL RNYLGRYKLP ATADQMVQPI PEDDQEKALE
AALEVLIDFV YGEIAAKRKQ ALRTMAELCR NFRSDRDFRE AILAYLQESE FSAELRTWIG
RGFDEIGLEK IRDLLGKLSS LDEIKRLVGT TRRMLDEDPG NVPLRYLSAV ARALSRVESE
ESVLEEVVSL TLQILRLKDR LRDPDEILAA LLGDLATARP ELLARAADRV LRLFGTPALA
RRLLQGPAGS DAVVRNHAAV LLMAESLRTI RESAFYQTLV NAV
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