Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2841 |
Symbol | |
ID | 8569512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013502 |
Strand | - |
Start bp | 44730 |
End bp | 46307 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_003292096 |
Protein GI | 268318378 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00141566 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTTT CGCACGAGGG GGTTTGCTGG CCGGTGGCAT GGGTGTACGA GTTTGCCTAC TGCCTGCGGC GGGGCTACTA CGCCTGGGTT GAAGGGCCCG GAGAGCCTGT TGCGCTGGAT ACCGGAGAAG GCGTGTGGCT GGCCTCGGAC GCCTGGTGTG GGCCGGTGCG GTGGGTACAG GACGGTGCCG GTTGTCCCGT TCCCCTGCTA CGGGTGCCCC GGGCATGCGC CGACGATTCC GACAGACGCC CCGAACATCT GATGCTGGCG GCCCTTGCCG ATCTGGTGGA GGCGCATACA GGGCAACCAG TGCGTCGGGG TCTTGTTCTC GACGCAACAA CAGGGCACCG GGAAGAGGTA ACGCTCGACG AAACGTTACG GGCGGCCTGG CAGTCGCTCG ACAGGCGTAT TCGGGCCGTC ATTCATGAAG GAAGCGTGCC GCCGCCAAGG GCCGACGGGC GCTGCCATCA CTGCCCACGT CTGGAGGTGT GCCGACCTTT TGACGGCCAT TCGAAAGAGG ATGCGGTGGC GATCATGCCA CCGGTTCGGC AGGCACGTAC GCTCTACGTG GACGAGATCG GAGCGGTCGT ACGCCGCAAG GGACGGCAGC TTGTCGTCAC CGTCAGCCGC GACGGCAGGC GGCAGGAACT GCTGCGTGTG CCCGCCCTGC TGGTGGATCA GGTGGTGCTG GTCGGACCCG TCCAGATCAC CTCGCAGGCG CTGCGGATGC TGCTACGTCG GAACGTGGAT ATCGTGTATC TATCAGGCGA GGGACGCTTC GAGGGAAGGC TGGCGGCTGA GTTCCATCCG CACGTGGCAT TGCGGCTGGC ACAGTACGAG GCCTTTCGCG ATCCTGAGCG GACCCTTACG CTGGCCCGCC TGTTTGTGCG GGGCAAGTTG CAGAACATGG CCGGCCTGTT GCGCCGCTAT GCCGACGAGT ATGGCAGCGC TTCGTTGCGC GCCGCGGCTT CCGAAATCAA CCGCGATCTG GAGCGCCTCG AGCAGGTTAC CACGCTGGAG GCGTTGCGCG GTGTGGAGGG CACGGCAAGC CGACGCTACT TTTCGGTTTT CGGCGAAATG CTGCGTGCCG AGGCCTATGC CCCGACCGGC TGGCCCGCGT TCCCGGGGCG CCACCGGCGA CCGCCTACCG ATCCCGTCAA CGCCACGCTG GGCTATCTCT ACGCGTTGCT ACTGGGTAAC GTGGTGGCGG CCTGCGCGCT GGCCGGGCTG GATCCCTACG TGGGCTATCT ACATGCGCCG GCTTACGGGC GCCCGTCGCT GGCACTCGAC CTGATGGAAG AGTTTCGCGC GCCCGCGGCC GATCGGCTTG CGCTGCGGCT GTTCAACCGG GGACGACTGC GGCCCCAACA CTTCGAGGAG CGCAACGGCG GGGTGTACCT GAACGAAGCG GGCCGAGCCG TCGTGCTGGA AGCCTGGCAG GCGCACCGCC AGCAAACCTC GGCGCATCCG GTGCTCGGCA TGGAGTTGTC GCTGGCCCGG CATTTCGAGG CGCAGGCCCG GCTGCTTGCC CGGGCGCTTC AGGAGCAGGG TATCGCCTAC ACGCCATTTG TCGCATAG
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Protein sequence | MQVSHEGVCW PVAWVYEFAY CLRRGYYAWV EGPGEPVALD TGEGVWLASD AWCGPVRWVQ DGAGCPVPLL RVPRACADDS DRRPEHLMLA ALADLVEAHT GQPVRRGLVL DATTGHREEV TLDETLRAAW QSLDRRIRAV IHEGSVPPPR ADGRCHHCPR LEVCRPFDGH SKEDAVAIMP PVRQARTLYV DEIGAVVRRK GRQLVVTVSR DGRRQELLRV PALLVDQVVL VGPVQITSQA LRMLLRRNVD IVYLSGEGRF EGRLAAEFHP HVALRLAQYE AFRDPERTLT LARLFVRGKL QNMAGLLRRY ADEYGSASLR AAASEINRDL ERLEQVTTLE ALRGVEGTAS RRYFSVFGEM LRAEAYAPTG WPAFPGRHRR PPTDPVNATL GYLYALLLGN VVAACALAGL DPYVGYLHAP AYGRPSLALD LMEEFRAPAA DRLALRLFNR GRLRPQHFEE RNGGVYLNEA GRAVVLEAWQ AHRQQTSAHP VLGMELSLAR HFEAQARLLA RALQEQGIAY TPFVA
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