Gene Rmar_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2824 
Symbol 
ID8569495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp27633 
End bp28427 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID 
ProductCRISPR-associated RAMP protein, Csm3 family 
Protein accessionYP_003292079 
Protein GI268318361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTT TTCTGGGCAA TATCATTCTC AAGGGCAAAA TGGAATGCCT GACGGGGCTG 
CACATCGGCG GCTCGAAGGA AAAGTTCGAG ATCGGCGGCG TCGATCAGCC CGTCATTCGC
GACCCGGCGA CGAACTATCC CTACGTGCCC GGCTCTTCGC TCAAGGGCAA GATGCGCGCG
CTGCTCTCGT TTGCGCTGGG CAAGGCGCAC GAGGATCCAA ATTTCAGGAG CTTCGATCCG
AAATGCCCTC TTCAACGTGT GTTCGGGACT TCCGCCGAGT CCCGGAATAT CGGCCCGTCG
CGTCTGATCG TGCGCGATGC GTTCCCGGAC GAGGCAACGA TCCGGATGTG GGAGAATCTG
GATACCGAAC TCCTCTACAC CGAGATCAAG GCGGAAAACA GCGTCGATCG GCTTACTTCG
GCCGCCAATC CGCGCTTTCC CGAGCGTGTC GTGCGGGGCT CGCGCTTCAA CGTGGAGTTC
GTTTTCAGCG TCTATGAGTC GCAGGACGCC GATTACTTTA GATATGTTAT CGAGGGATTG
CGGTTGCTGG AGCATTCCTG GCTGGGACGA AGCGGCACGC GCGGCTACGG CCAGGTAAAA
TTCAGGCTGG CCGAGCCGAT CATCGTCACG CTCGACGACT ATCTGGAAGG GACGGATACG
TATCGCCAGG CCGGCCGCTC CCATGAGGAG ATGACGTTCG ATCTGGAAAC GGCCGACTTC
AACGAAAGCC GGTTCAATCA GATCAAGCAG GAGTTCCTTA AGATTGCCGA GAAGCTTGCC
ACGAATCAGG CATGA
 
Protein sequence
MAGFLGNIIL KGKMECLTGL HIGGSKEKFE IGGVDQPVIR DPATNYPYVP GSSLKGKMRA 
LLSFALGKAH EDPNFRSFDP KCPLQRVFGT SAESRNIGPS RLIVRDAFPD EATIRMWENL
DTELLYTEIK AENSVDRLTS AANPRFPERV VRGSRFNVEF VFSVYESQDA DYFRYVIEGL
RLLEHSWLGR SGTRGYGQVK FRLAEPIIVT LDDYLEGTDT YRQAGRSHEE MTFDLETADF
NESRFNQIKQ EFLKIAEKLA TNQA