Gene Rmar_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2790 
Symbol 
ID8569461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3238948 
End bp3240684 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content67% 
IMG OID 
ProductGluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_003292047 
Protein GI268318328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGG TGCTTGAACG GGCCCCGGAG TACGACGTGT GCATTATCGG TTCCGGGGCC 
GGGGGCGGCA TGGCCGCCTA CGTACTGACC CAGGCCGGGG CCAACGTGGT GATGCTCGAA
GCGGGGCCGA TGTGGGATGT GACCCGCGAC GGCGCCATGT TTTCTTGGAA CTACGAGTCG
CCCCGGCGCG GTGCTTCCAC CGTGGAGCGT CCTTTCGGCG AGTTCGATGC CTGCTACGGC
GGCTGGGAGA TTCCCGGCGA GCCCTACCTG AAGGACGAAG GGACCGACTG GATGTGGTTC
CGGGCGCGGA TGCTGGGCGG GCGCACCAAC CACTGGGGAC GCATCTCGCT GCGCTTCGGG
CCCGACGACT TCAAGGGCAA AAGCCGGGAC GGCTACGGCG ACGACTGGCC GATCGGCTAC
GAAGACCTGG CGCCCTACTA CGACAAAGTC GATCGCCTGA TCGGCGTGTT CGGCTCGAAG
GATAACTTCT ACAACGAGCC GGACGGTATC TTTCTGCCGC CGCCGAAGCC GCGCTGCTAC
GAGCTGCTGG TGGCGAAGGC GTGCGAAAAG CTGGGCATTC CGGTGCTGGC CTCGCGGCTG
TCGATCCTGA CGCGACCGCT CAACGGCCGC CCGGCCTGTC ACTACTGCTC CCAGTGCAAC
CGGGGCTGCA CGGTGCGGGC CAACTTCGCC TCGAGCTACG TGCTGATTCC GCCCGCGCTG
GAGACGGGCC GACTGACGAT CATCCCGAAC GCCATGGCGC GGGAGATTCT GGTGGACGAG
AACCTGCGGG CGCGGGGCGT TTCCTACATC GACAAGGAGA CGATGCAGGA GCGGCAGGTG
CGGGCGCGGA TCGTGGTGCT GGGGGCCAGC GCCTGCGAGA CGGCGCGGCT GCTTCTTAAC
TCACGCGGCC CGCGCTACGA AAACGGTCTG GCCAACTCGA GCGGGCTGGT GGGCCGTTAC
CTGATGGACT CGACGGGCAC GAGCGTGGCG GGCTTCATCC CGGCGCTGGT CAAGAACCTG
CCGCACAACG AGGACGGCGT GGGTGGCATG CACATCTACA TCCCCTGGTG GGCCTACAAC
CAGAAGCTGG ACTTTCCGCG CGGGTATCAT CTGGAGGTGT GGGGTGGGCG CCGCATGCCG
GGCTACGGCT TCGGGGCGGG TATCCACCGG CTCAACGGAC GGCTGCCCGG TCCGGACGGC
CGACCCCGTC CGAAAGGCGG CGGGGGGTAT GGCCTGCAGC TCAAAGAAGA CTACCGCCAG
CTCTACGGCG CGATCGTGGG CTTTTCGGGG CGCGGCGAGA TGATCGCCCG CTACGAGAAC
TACTGCACGG TCGATCCGAA CGTAGTGGAC CGCTACGGCA TTCCGGTGCT GCGCTTCCAC
GTGAAGTGGA GCGACGAAGA GATCCGCCAG GCGCGGCACA TGCAGGAGAC GGCGCGGGAG
ATCATCCGGG CGATGGGCGG CGAGCCGCTC GACGAGATGC CGGGGCCGGA GCGGGGCTAC
GGCATTACGA AGCCGGGCGA GATCATCCAC GAGGCGGGCA CCACGCGCAT GGGGCGCGAT
CCGAAGACCT CGGTGCTGAA CCCGTTCTGT CAGGCGCACG ACGTGCCGAA CCTGTTCGTG
GTCGATGCCG GGCCGTTCGT GTCGATGCCA CACAAGAACC CGACCTGGAC GATTCTGGCG
CTGGCCTGGC GCACGGCGGA ATACATTGTC GAACAGCGCA AACAGGGCAA CCTATGA
 
Protein sequence
MPQVLERAPE YDVCIIGSGA GGGMAAYVLT QAGANVVMLE AGPMWDVTRD GAMFSWNYES 
PRRGASTVER PFGEFDACYG GWEIPGEPYL KDEGTDWMWF RARMLGGRTN HWGRISLRFG
PDDFKGKSRD GYGDDWPIGY EDLAPYYDKV DRLIGVFGSK DNFYNEPDGI FLPPPKPRCY
ELLVAKACEK LGIPVLASRL SILTRPLNGR PACHYCSQCN RGCTVRANFA SSYVLIPPAL
ETGRLTIIPN AMAREILVDE NLRARGVSYI DKETMQERQV RARIVVLGAS ACETARLLLN
SRGPRYENGL ANSSGLVGRY LMDSTGTSVA GFIPALVKNL PHNEDGVGGM HIYIPWWAYN
QKLDFPRGYH LEVWGGRRMP GYGFGAGIHR LNGRLPGPDG RPRPKGGGGY GLQLKEDYRQ
LYGAIVGFSG RGEMIARYEN YCTVDPNVVD RYGIPVLRFH VKWSDEEIRQ ARHMQETARE
IIRAMGGEPL DEMPGPERGY GITKPGEIIH EAGTTRMGRD PKTSVLNPFC QAHDVPNLFV
VDAGPFVSMP HKNPTWTILA LAWRTAEYIV EQRKQGNL