Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2790 |
Symbol | |
ID | 8569461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 3238948 |
End bp | 3240684 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_003292047 |
Protein GI | 268318328 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCAGG TGCTTGAACG GGCCCCGGAG TACGACGTGT GCATTATCGG TTCCGGGGCC GGGGGCGGCA TGGCCGCCTA CGTACTGACC CAGGCCGGGG CCAACGTGGT GATGCTCGAA GCGGGGCCGA TGTGGGATGT GACCCGCGAC GGCGCCATGT TTTCTTGGAA CTACGAGTCG CCCCGGCGCG GTGCTTCCAC CGTGGAGCGT CCTTTCGGCG AGTTCGATGC CTGCTACGGC GGCTGGGAGA TTCCCGGCGA GCCCTACCTG AAGGACGAAG GGACCGACTG GATGTGGTTC CGGGCGCGGA TGCTGGGCGG GCGCACCAAC CACTGGGGAC GCATCTCGCT GCGCTTCGGG CCCGACGACT TCAAGGGCAA AAGCCGGGAC GGCTACGGCG ACGACTGGCC GATCGGCTAC GAAGACCTGG CGCCCTACTA CGACAAAGTC GATCGCCTGA TCGGCGTGTT CGGCTCGAAG GATAACTTCT ACAACGAGCC GGACGGTATC TTTCTGCCGC CGCCGAAGCC GCGCTGCTAC GAGCTGCTGG TGGCGAAGGC GTGCGAAAAG CTGGGCATTC CGGTGCTGGC CTCGCGGCTG TCGATCCTGA CGCGACCGCT CAACGGCCGC CCGGCCTGTC ACTACTGCTC CCAGTGCAAC CGGGGCTGCA CGGTGCGGGC CAACTTCGCC TCGAGCTACG TGCTGATTCC GCCCGCGCTG GAGACGGGCC GACTGACGAT CATCCCGAAC GCCATGGCGC GGGAGATTCT GGTGGACGAG AACCTGCGGG CGCGGGGCGT TTCCTACATC GACAAGGAGA CGATGCAGGA GCGGCAGGTG CGGGCGCGGA TCGTGGTGCT GGGGGCCAGC GCCTGCGAGA CGGCGCGGCT GCTTCTTAAC TCACGCGGCC CGCGCTACGA AAACGGTCTG GCCAACTCGA GCGGGCTGGT GGGCCGTTAC CTGATGGACT CGACGGGCAC GAGCGTGGCG GGCTTCATCC CGGCGCTGGT CAAGAACCTG CCGCACAACG AGGACGGCGT GGGTGGCATG CACATCTACA TCCCCTGGTG GGCCTACAAC CAGAAGCTGG ACTTTCCGCG CGGGTATCAT CTGGAGGTGT GGGGTGGGCG CCGCATGCCG GGCTACGGCT TCGGGGCGGG TATCCACCGG CTCAACGGAC GGCTGCCCGG TCCGGACGGC CGACCCCGTC CGAAAGGCGG CGGGGGGTAT GGCCTGCAGC TCAAAGAAGA CTACCGCCAG CTCTACGGCG CGATCGTGGG CTTTTCGGGG CGCGGCGAGA TGATCGCCCG CTACGAGAAC TACTGCACGG TCGATCCGAA CGTAGTGGAC CGCTACGGCA TTCCGGTGCT GCGCTTCCAC GTGAAGTGGA GCGACGAAGA GATCCGCCAG GCGCGGCACA TGCAGGAGAC GGCGCGGGAG ATCATCCGGG CGATGGGCGG CGAGCCGCTC GACGAGATGC CGGGGCCGGA GCGGGGCTAC GGCATTACGA AGCCGGGCGA GATCATCCAC GAGGCGGGCA CCACGCGCAT GGGGCGCGAT CCGAAGACCT CGGTGCTGAA CCCGTTCTGT CAGGCGCACG ACGTGCCGAA CCTGTTCGTG GTCGATGCCG GGCCGTTCGT GTCGATGCCA CACAAGAACC CGACCTGGAC GATTCTGGCG CTGGCCTGGC GCACGGCGGA ATACATTGTC GAACAGCGCA AACAGGGCAA CCTATGA
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Protein sequence | MPQVLERAPE YDVCIIGSGA GGGMAAYVLT QAGANVVMLE AGPMWDVTRD GAMFSWNYES PRRGASTVER PFGEFDACYG GWEIPGEPYL KDEGTDWMWF RARMLGGRTN HWGRISLRFG PDDFKGKSRD GYGDDWPIGY EDLAPYYDKV DRLIGVFGSK DNFYNEPDGI FLPPPKPRCY ELLVAKACEK LGIPVLASRL SILTRPLNGR PACHYCSQCN RGCTVRANFA SSYVLIPPAL ETGRLTIIPN AMAREILVDE NLRARGVSYI DKETMQERQV RARIVVLGAS ACETARLLLN SRGPRYENGL ANSSGLVGRY LMDSTGTSVA GFIPALVKNL PHNEDGVGGM HIYIPWWAYN QKLDFPRGYH LEVWGGRRMP GYGFGAGIHR LNGRLPGPDG RPRPKGGGGY GLQLKEDYRQ LYGAIVGFSG RGEMIARYEN YCTVDPNVVD RYGIPVLRFH VKWSDEEIRQ ARHMQETARE IIRAMGGEPL DEMPGPERGY GITKPGEIIH EAGTTRMGRD PKTSVLNPFC QAHDVPNLFV VDAGPFVSMP HKNPTWTILA LAWRTAEYIV EQRKQGNL
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