| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2712 |
|---|
| Symbol | |
|---|
| ID | 8569381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 3142356 |
|---|
| End bp | 3144047 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | CTP synthase |
|---|
| Protein accession | YP_003291971 |
|---|
| Protein GI | 268318252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCA AGTACATTTT TGTGACCGGA GGCGTTACGT CATCGCTGGG GAAAGGCATC
GTCTGCGCTT CGCTGGGCCG CCTGCTCGAA GCGCGCGGCC TGCGCGTGAC GATCCAGAAG
CTCGATCCGT ACATCAACGT CGATCCCGGC ACGATGAACC CCTACGAGCA CGGGGAGGTG
TACGTGACCG AGGACGGCGC CGAGACCGAC CTGGACCTGG GGCACTACGA GCGCTTCCTG
GGGCGGCCCA CCAGCCAGGC CAACAACGTC ACGACCGGCC GGATCTACCT GGAGGTCATC
ACGAAGGAGC GGGCCGGGGC CTATCTGGGC AAAACCGTCC AGGTGGTGCC GCACATCATC
GACGAGATCA AGCGCTGGAT GCTCAAGCTC GGCGAGACGG GCCAGTACGA TGTGGTGATC
ACCGAAATCG GCGGGACGGT GGGCGACATC GAAAGCCAGC CTTATCTGGA GGCGATCCGC
CAGCTTCGCT ACGAACTCGG CCAGCGCAAC ACGCTCATCA TTCATCTGAC GCTGGTGCCT
TATCTGGAGG CGGCGGGCGA GCTCAAGACC AAGCCCACGC AGCACTCGGT CAAGACGCTG
CTCTCGCACG GGCTTCAGCC CGACGTGCTT GTCTGTCGCT CCGAGTATCC GCTCGATGCC
GACCTGCGGC GCAAAATCGC GCTCTTCTGT AACGTCGAAC CGCGGGCCGT CATCGCCGCA
CTCGATGCCG AATCGATCTA CGAGGTGCCG CTGCTGCTCC GGGAGGAAGG GCTCGACGCC
ATTGTGATCG AGCGGCTGTT TGACGAGCAG GAGCGGCAGG CGCTGCACGA GCCGGATCTG
GACGACTGGA TCGATTTTCT CCGGCGTCTG AAAAGCCCGA AGGCCACCGT GCGCGTGGCC
CTTGTGGGCA AGTACGTGAC GCACCAGGAC GCCTACAAGT CGATCATGGA GAGCTTCGTG
CTGGCCGGGG CCGAGCACGG CGTGCAGGTG GAGGTCAAAC AGGTACTCTC CGACGAGATC
ACGCGCGAGA ACGTGGCCGA ACTGCTGGGC GATGTGTCGG GCATTCTGGT AGCGCCGGGC
TTTGGCGAGC GTGGTATCGA GGGCAAGATC GAGGCGGTGC GTTTTGCCCG CGAACAGAAC
ATCCCGTTTT TCGGGATCTG TCTGGGCATG CAGTGCGCCG TGATCGAATT TGCCCGGAAC
GTGTGCGGCT GGCACGACGC CAACTCGACC GAGTTCGACC CGGACACGCC CCATCCGGTC
ATCGACCTGA TGGCCGAGCA GAAAAAGATC ACCGACAAAG GCGGCACAAT GCGGCTGGGC
GCCTACGACT GTCACTTGGT GGAAGGCTCC CGCGTGCGCG CCATCTACGG CACCTCGGAC
GTGCGCGAGC GGCACCGCCA CCGCTACGAG GTCAACAACG TACTTCGCTA CAAGCTGCTC
GAGCACGGCA TGCAGTTTAC CGGGCTGAAC CTGGAGCGCG ATCTGGTGGA GATCATCGAA
TTGCCCGAGC ACCGCTGGTT CATCGGCGTG CAGTTCCACC CCGAGTACAA ATCGACAGTG
GGGCGGCCGC ATCCGCTCTT TTCGGCGTTT GTGGCGGCCT GCGTCGAGTA CGCCCGCGAG
AAAGGACAGC TGCAGACGCC CCGGCCGCGT CGGCGTCAGA AAACGCTGCG GCTGGCGTCG
GCCCGCATGT GA
|
|---|
| Protein sequence | MPSKYIFVTG GVTSSLGKGI VCASLGRLLE ARGLRVTIQK LDPYINVDPG TMNPYEHGEV
YVTEDGAETD LDLGHYERFL GRPTSQANNV TTGRIYLEVI TKERAGAYLG KTVQVVPHII
DEIKRWMLKL GETGQYDVVI TEIGGTVGDI ESQPYLEAIR QLRYELGQRN TLIIHLTLVP
YLEAAGELKT KPTQHSVKTL LSHGLQPDVL VCRSEYPLDA DLRRKIALFC NVEPRAVIAA
LDAESIYEVP LLLREEGLDA IVIERLFDEQ ERQALHEPDL DDWIDFLRRL KSPKATVRVA
LVGKYVTHQD AYKSIMESFV LAGAEHGVQV EVKQVLSDEI TRENVAELLG DVSGILVAPG
FGERGIEGKI EAVRFAREQN IPFFGICLGM QCAVIEFARN VCGWHDANST EFDPDTPHPV
IDLMAEQKKI TDKGGTMRLG AYDCHLVEGS RVRAIYGTSD VRERHRHRYE VNNVLRYKLL
EHGMQFTGLN LERDLVEIIE LPEHRWFIGV QFHPEYKSTV GRPHPLFSAF VAACVEYARE
KGQLQTPRPR RRQKTLRLAS ARM
|
|---|
| |