Gene Rmar_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2558 
Symbol 
ID8569224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2974303 
End bp2975310 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003291822 
Protein GI268318103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAG GCGTTGCATT CGTTACCGGC GGAACCGGCT TCATCGGCAG CCATCTGGTG 
GAAGAGCTGC TGCGCCGGGG CTACCGCGAA GTGCGCTGTC TGGTGCGCAA AGAACTGCGC
TGGCTCGAAG GACTCGACAT CGTGCCCGTC CGCGGCGACT TTTCCCGAAT CGATGTGCTG
TGGGAGGCCG TGCGCGACGC GGATGTGGTC TTTCACGTGG CGGGCGTGAC GCGGGCGCGC
GACTGGGCCA CCTTCGAGCA GGGCAATATC ACGGCCACGC TGAACCTGCT GGGCACCATC
CTGGAAGCCA ACCCGAACGT GCGCAAAGTG CTCATTACGA GCAGCCTGGC GGCCGTGGGC
TACTGTCCGG GCGGCGTGGC CACCGAGGAG TCGCCGCTGC GTCCCATCAG CGCCTACGGC
CGGAGCAAGG CGCTCATGGA GCAGGCGTTG CGGGCGCCCC GCGCCGACGG CCCGCCGTTT
GCCGAGCTGC TCCCCATCGT CGTGGTCCGC CCGCCGGCCG TCTACGGCCC CCGCGAAGCC
GACATCTACA CGTTCTTCCG TACGGTCAGC CGGGGGCTGT GCCCCATCGT GGGCAGCGGC
CGCCGCCCCG AGCTGAGCCT GGTGCACGTG CGCGACCTGG TGCGCGGCAT GGTGGACGCC
GCCGAGTCGG ACGTTACCAC CGGCCAGACC TACTTCATCG GCAGCGAGCA ATTCTACTCC
TGGCGCGAGA TCCGGGACGC CACACTGAAA GCCCTGGGCC GCCGGGCGCT GACCGTGCAC
ATCCCGCCGT TTCTGGTGGA ACCGATCGGC GCGCTGGTGG AGCTGGCCGG GCGCCTGACG
GGCACCTACC CGCCGCTCAA CCGCGAAAAA GCCCGCGAAA TCCGCCACGC CTGCAAGATG
TGCGCGGTGG ACAAAGCCCG CCGCGACTTT GGCTACCGCC AGCAGATCGG CCTCGAAGAA
GGGATTCAGG AGACCATCGC CTGGTATCGG CAGCAGGGCT GGTTGTAA
 
Protein sequence
MNRGVAFVTG GTGFIGSHLV EELLRRGYRE VRCLVRKELR WLEGLDIVPV RGDFSRIDVL 
WEAVRDADVV FHVAGVTRAR DWATFEQGNI TATLNLLGTI LEANPNVRKV LITSSLAAVG
YCPGGVATEE SPLRPISAYG RSKALMEQAL RAPRADGPPF AELLPIVVVR PPAVYGPREA
DIYTFFRTVS RGLCPIVGSG RRPELSLVHV RDLVRGMVDA AESDVTTGQT YFIGSEQFYS
WREIRDATLK ALGRRALTVH IPPFLVEPIG ALVELAGRLT GTYPPLNREK AREIRHACKM
CAVDKARRDF GYRQQIGLEE GIQETIAWYR QQGWL