Gene Rmar_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2487 
Symbol 
ID8569153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp2897809 
End bp2898567 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_003291752 
Protein GI268318033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACGT ATCGGTTGTT GATCGAGTAC GACGGAACGG ATTTCAGCGG CTGGCAGATC 
CAGCGCAACG GTCCCAGCAT TCAGGCGGCG CTGGAGGAAG CGCTGGCCGT GGTGTTGCGC 
GAGCGCGTGC GCGTGGTCGG CTCGGGGCGC ACCGATGCCG GCGTCCATGC CCGCGGCCAG 
GTGGCGCACT TTCGCACGGA CCGCCCGGTC GATCCGGAGC GGCTGCAGGG GTCGCTGAAC 
GGCCTGCTGC CGCCCAGCAT AGCGATTCGG TCGGTCAGTC TGGCGCCCGA TGACTTTCAC 
GCCCGCTACG ATGCCCGCTG GCGCCGCTAT CACTACTACG TGGCGACCGT CCCCTGCGCG 
CTGGAGCGCC ATCTGCGCTG GTACCTGCGG CCGGCGCCCG ACTTCGAGCG CATGAACCGG 
GCCGCCTGCG ACCTGCTGGG CACGCACGAC TTCACCACGT TCTGCCGCAC ACAGACCGCC 
ACACGCAACC GCACCTGCAC GGTGTACCTG GCCCGCTGGG TGCCGGATCC CCGTCCCGGC 
GACTGGCATT TTGAGATCGT GGCCGACCGC TTTCTGCACG GCATGGTGCG GGCCATCGTG 
GGCACGCTGA TCGAGATCGG CCGGGGCCAG CGCGACATAG CAGCCCTCCC GGAGCTGCTG 
GCCGCACGCG ATCGGCGGCT GGCCGGTCCG GCCGCCCCGG CCCACGGGCT CGTGCTGGAG 
GCCGTCGGCT ACGAAGACGA CCCGTTGCCC GTCCCATGA
 
Protein sequence
MPTYRLLIEY DGTDFSGWQI QRNGPSIQAA LEEALAVVLR ERVRVVGSGR TDAGVHARGQ 
VAHFRTDRPV DPERLQGSLN GLLPPSIAIR SVSLAPDDFH ARYDARWRRY HYYVATVPCA 
LERHLRWYLR PAPDFERMNR AACDLLGTHD FTTFCRTQTA TRNRTCTVYL ARWVPDPRPG 
DWHFEIVADR FLHGMVRAIV GTLIEIGRGQ RDIAALPELL AARDRRLAGP AAPAHGLVLE 
AVGYEDDPLP VP