Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2441 |
Symbol | |
ID | 8569107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2834795 |
End bp | 2836672 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | Na+/solute symporter |
Protein accession | YP_003291707 |
Protein GI | 268317988 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.231666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTGC ACCTTACCAC GCTCGACCTG CTCATCATTC TGGCCTACGG GCTGATCACC GTCGGGATCG GCATCTGGAT TTCAAAGCAC GCGGCTTCCA GTATTCGTCA CTACTTCCTG GGGGGTAACC GCATCCCCTG GTACATGCTG AGCCTGTCGA ACGCCTCGGG CATGTTCGAC ATCAGCGGTA CCATGTGGAT GGTTTACCTG CTTTTCGTCT ATGGACTGAA GAGCATCTGG ATTCCCTGGC TCTGGCCCGT CTTCAACCAG ATCTTCCTGA TGGTCTATCT GTCGATCTGG TTGCGACGGT CCGGGGTGAT GACCGGTGCC GAGTGGATCA CCTTTCGTTT CGGGACGGGC CGTGGGGCGC AGCTGGCCCA TCTGATCGTG GTGCTGTTTG CCATCTTCAA CGTCATTGGC TTTCTGGCCT ACGGGTTTAT CGGTATCGGC AAGTTTGCCG CCACGTTTCT GCCCTGGAAA CTCTCCGACG ATCCGGTCAC GAACATGCAC CTCTACGGTC TGATCATCAC GGCGCTGACC ACGATCTATG TGGTCAAGGG CGGCATGTTC AGCGTGGTGG CTACCGAAGT GCTGCAGTTT TTCATCATGA CGATCGGCTG CGTGGCTGTG GGCATCATCG CCATGCAGCG CATCTCACCG GAGATGGTGG CGGCCGTGGT GCCGGACGGC TGGTTCGATC CGTTCTTCGG CTGGAAACTG GATCTGGACT GGTCCCGCCT TATGCCCGCC GCGCAGGAGA GAATTGCCGC CGACGGCTGG GAGCTGTTCT CGGCCTTTTT CATGATGATG CTCTTCAAGG GCGTGCTGCA GGCGATGGCA GGTCCGGCAC CCAACTACGA CATGCAGCGC GTGCTTTCGG CCCGCACGCC CCGCGAGGCG GCCAAGATGA GCGGCTTCGT GAACGTCGTG TTGCTCGTGC CGCGCTACAT GCTGGTGACG GGGCTGACCG TGCTGGCGCT CGTGTTCTTC TCCGACGAAC TCAACGCGAT GGGCTCCAAC GTCGATTTCG AACTGGTGCT GCCCTTTGCG CTGCGCGAGT TTGTGCCTTC CGGGCTGACC GGGCTGCTGA TTGCCGCGCT ACTGGCCGCT TTCATGTCGA CCTATGCGGC GACGGTCAAC GCGGCCCCGG CTTACATCGT CAACGACATC TACAAGCGCT ACATCAACCC CCACGCCAGC GAGAAAACCT ACGTCTGGAT GAGCTACCTC ACCTCGCTGC TCGTGGTGGT GATCGGCACG GCCGTGGGGC TGTTCGTCTA TTCGCTGAAT GACATTATCC AGTGGATCGT GGCGGCGCTC TACGGCGGCT ACACGGCTTC GAACCTGCTC AAGTGGCACT GGTGGCGTTT CAACAGCTAC GGGTACTTCT GGGGCATGGT GGCCGGGATG ATCGCCGCCA TGGTGGTCCC GGCCCTGATG CCCTTCGTGG CGACCATCTA CACCTTTCCG ATTATTCTGG GCGTCTCGCT GATCGGCTGC ATTGCGGGCA GTCTGTTTAC ACCACCCGAC GACGAAGAAG TGCTGAAAAA CTTTTACCTG AAGGTGCGCC CCTGGGGCTT CTGGAAGCCG ATCCACGAGA AGCTGGCCGC CGAATTTCCG GAGCTGGAAG CCAATCGGAA CTTCAAACGC GACATGCTGA ACGTGGCCGT GGGCATCGTC TGGCAGACGG CGCTGACGGC CGCCGGGATC TATCTGGTAC TGGAACGCAC TACCGAGCTG CTGATCTGCG CCGGGCTGAT CGTGGCCTGC TCGATTTTCC TGAAATACAA CTGGTACGAT CGCATGGAAG ACTATCCGCG CGATCTGGAG CAGTATGCCA CGAAAACCGC CCGCCCGGTG GGAATGTCTG CCGGTTGA
|
Protein sequence | MELHLTTLDL LIILAYGLIT VGIGIWISKH AASSIRHYFL GGNRIPWYML SLSNASGMFD ISGTMWMVYL LFVYGLKSIW IPWLWPVFNQ IFLMVYLSIW LRRSGVMTGA EWITFRFGTG RGAQLAHLIV VLFAIFNVIG FLAYGFIGIG KFAATFLPWK LSDDPVTNMH LYGLIITALT TIYVVKGGMF SVVATEVLQF FIMTIGCVAV GIIAMQRISP EMVAAVVPDG WFDPFFGWKL DLDWSRLMPA AQERIAADGW ELFSAFFMMM LFKGVLQAMA GPAPNYDMQR VLSARTPREA AKMSGFVNVV LLVPRYMLVT GLTVLALVFF SDELNAMGSN VDFELVLPFA LREFVPSGLT GLLIAALLAA FMSTYAATVN AAPAYIVNDI YKRYINPHAS EKTYVWMSYL TSLLVVVIGT AVGLFVYSLN DIIQWIVAAL YGGYTASNLL KWHWWRFNSY GYFWGMVAGM IAAMVVPALM PFVATIYTFP IILGVSLIGC IAGSLFTPPD DEEVLKNFYL KVRPWGFWKP IHEKLAAEFP ELEANRNFKR DMLNVAVGIV WQTALTAAGI YLVLERTTEL LICAGLIVAC SIFLKYNWYD RMEDYPRDLE QYATKTARPV GMSAG
|
| |