| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2440 |
|---|
| Symbol | |
|---|
| ID | 8569106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 2833563 |
|---|
| End bp | 2834765 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | glycosidase PH1107-related protein |
|---|
| Protein accession | YP_003291706 |
|---|
| Protein GI | 268317987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.512548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGC GAATGGCACC GACCGAGGCG TTTGCGTTGC GTCTGAAACG ACTGGAAGCC
GCTTACGAAG AGCTTATTAC GCGCCCGAAC GAGCCGCTGC CCGACGGCAA CGGCATCATC
ACGCGCTACC GCTATCCGGT CCTGACGGCC GCCCACACGC CCATCTTCTG GCGCTACGAC
CTGAACCCGG AGACGAACCC CTACCTCATG GAGCGCATGG GGATCAACGC GGTGTTCAAT
CCGGGGGCCA TCAAGCTGGG CGACCGCTAC CTGCTCGTGG CGCGCGTGGA GGGCGTCGAT
CGCAAGTCGT TCTTTGCCGT GGCCGAAAGT CCCAACGGCA TCGACAACTT CCGCTTCTGG
GACGAACCGA TCGTGCTGCC AGAGACGGAC GATCCGGACG TCAACGTTTA CGACATGCGC
CTGACCCTGC ACGAGGACGG CTGGATCTAC GGGGTGTTCT GCACCGAACG CAAAGACCCG
AAGGCACCAC CCACCGACAC GACCGCGGCC ATGGCCCAGT GCGGCATCGC CCGTACGAAG
GACCTGAAAA CGTGGGAGCG GTTGCCGGAT CTGAAGACGC CCTCGCCCCA GCAGCGCAAC
TGCGTGCTGC ACCCGGAGTT CGTCGACGGC AAATACGCTT TCTACACCCG ACCGCAGGAC
GATTTCATTG AGGCTGGATC AGGGGGCGGT ATCGGCTGGG GACTGTGTGC GGACATCACG
AATCCGGTCA TCACAGAAGA GCGCATTGTC GATCCCCGCG TCTACCACAC CATCAAAGAA
GCCAAAAACG GCCTGGGACC GCCGCCCATC AAGACGCCGC ACGGCTGGCT GCACCTGGCC
CATGGCGTGC GTAACACGGC GGCCGGCCTG CGCTACGTGC TCTATCTGTT CATGACGGCG
CTGGACGAGC CCTGGCGCGT GATCTATGCG CCGGGTGGTT ACTTCATGGC GCCGGAGGGC
GAGGAACGCG TGGGCGACGT GTCGAACGTA CTCTTCTGCA ACGGGTGGAT TCTGGACGAC
GACGGCCGGG TGCTGATCTA CTACGCTTCG TCCGACACGC GCTGCCACGT GGCGACCTCG
ACGCTCGACC GGCTGCTGGA TTACGTCATG CACACGCCGC CCGACGGCGG CCGCTCGGCC
GTCTGCGTGC AGCAGCGACT GGAACTCATC CGACGGAACC TGCAACTGCT GAAGCGCCCG
TGA
|
|---|
| Protein sequence | MEVRMAPTEA FALRLKRLEA AYEELITRPN EPLPDGNGII TRYRYPVLTA AHTPIFWRYD
LNPETNPYLM ERMGINAVFN PGAIKLGDRY LLVARVEGVD RKSFFAVAES PNGIDNFRFW
DEPIVLPETD DPDVNVYDMR LTLHEDGWIY GVFCTERKDP KAPPTDTTAA MAQCGIARTK
DLKTWERLPD LKTPSPQQRN CVLHPEFVDG KYAFYTRPQD DFIEAGSGGG IGWGLCADIT
NPVITEERIV DPRVYHTIKE AKNGLGPPPI KTPHGWLHLA HGVRNTAAGL RYVLYLFMTA
LDEPWRVIYA PGGYFMAPEG EERVGDVSNV LFCNGWILDD DGRVLIYYAS SDTRCHVATS
TLDRLLDYVM HTPPDGGRSA VCVQQRLELI RRNLQLLKRP
|
|---|
| |