Gene Rmar_2232 details

Gene Information

• Locus tag: Rmar_2232
• ID: 8568896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 2596350
• End bp: 2597078
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 65%
• Product: flagellar basal body rod protein
• Protein accession: YP_003291499
• Protein GI: 268317780

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.3997
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTTAC GCCTGCAGAA TGCCGCGGCG TCGATGACCG AGGCGATCCG CCAGCAGGAA 
CGTCTCGCCA ACAACCTGGC CAACGTCAAC ACGGCCGGCT ATAAACAGGA GCGCTTCTTC 
GTGGAGGCGC TCAACGAACG GCTCGACGCC GAACGCTCGC CGAGAAGCGA CCGGCGCCTC 
ACGCAGTGGA ACGACCTGAC CCAGGGGGCG CTCGAGCACA CGGGCAGCCC GCTGGACGTG 
GCCATCGAAG GCGACGGTTT CTTCGTGGTC ACCGATGCGG CGACCGGGGC CACCTTCTAC 
ACGCGCGCCG GCCAGTTTCG ACTGGACGGG GAAGGTTACC TGCGCACGAT CGACGGCCTG 
CTTGTGGAAG GCGAAGACGG TCCGATCCAG CTCCTGCCCC ACGAGCGCAA CCGCACGCTT 
TCGATCAGTC AGGACGGCGT GCTGCGCGCC GACGAACGCG AGGTCGCCCG CCTGCGCATC 
GTGCGCTTCG CCCGCCCCGA AGCGCTGCAG CGCGTCGAAG GCGCCCGCTT TGCCGCCACC 
GACCAGGAGC CCCTTCCGGT CGAAACACCC CACCTGCGTC CCGGCTTCCT GGAAAGCAGC 
AACGTAAATC CGGTGCTCGC CATGACCGAG ATGATCGAGC ACTTTCACCG CTTCGAGACG 
CAGCAGAAGG TCATCCAGAC CACCGATCAG CTGCTCGGAC AGATTACCCG GGATCTCGGA 
AAGTTCTAA 

 

Protein sequence

MLLRLQNAAA SMTEAIRQQE RLANNLANVN TAGYKQERFF VEALNERLDA ERSPRSDRRL 
TQWNDLTQGA LEHTGSPLDV AIEGDGFFVV TDAATGATFY TRAGQFRLDG EGYLRTIDGL 
LVEGEDGPIQ LLPHERNRTL SISQDGVLRA DEREVARLRI VRFARPEALQ RVEGARFAAT 
DQEPLPVETP HLRPGFLESS NVNPVLAMTE MIEHFHRFET QQKVIQTTDQ LLGQITRDLG 
KF