| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2160 |
|---|
| Symbol | |
|---|
| ID | 8568822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 2514128 |
|---|
| End bp | 2515459 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_003291427 |
|---|
| Protein GI | 268317708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA ACGGAGCCCA GAGTAAAGCC GGAGACTGGC GGAATCACAA GCGGGTGCTG
CTCCCGCCCA TTCGGGATCT GCACCGGCTG GAAGTCTACG AAGCGCACGG GGGCTACCAG
ACCCTGCGCG AAGTGCTGAC CTCCGACCGC TGGGATCCCA AGTCGGTCAT CGAAGAAGTC
AAAAAGAGCA AGCTGCGCGG ACGGGGCGGC GCCGGCTTCC CCACCGGGCT GAAGTGGAGC
TTCATGCCCC CGGTGGACGA TCGGCCCCGC TTCCTGTGCT GCAACGGCGA CGAAAGCGAG
CCGGGCACGT TCAAGGACCG CCAGCTCATG GAGTTCAATC CCCACCAGAT TTTCGAGGGG
ATTCTGATCG CCTGCTACGC CATGTCGGTG CGCACGTGCT ACCTGTACGT GCGCGGCGAA
TTTGCCCGGT GGATCGAGCA CATGGAGCGG GAGCTGGAAA AGCTCTACGC GAAAGGCTAC
GTGGGGAAAA ACATTATGGG CACGGACTTC TCGGCCGACA TCGTGATCCA CAAGGGAGCC
GGGGCCTACA TCTGCGGCGA GGAGTCCAGC CTGATGGAGT CGGTCGAGGG CAAGCGGGCC
TACCCGCGCA TCAAGCCGCC GTTTCCAGCC CAGCGAGGCC TGTGGGGCTA CCCCACCACG
ATCAACAACG TGGAGACGCT GGCGAACGTC CCGCTCATTC TGCGCAACGG CGGCGAGTGG
TTCGCGTCCA TCGGCGCGCC CAACCATCCC GGTCCGGTGC TCTACGGCAT CTCGGGCCAC
GTCAACCGCC CCGGCGTCTA TGAATACCCC ACCGGCATGC TGATCACCGA CCTGATCTAC
GAGGTGGCCG GAGGCATCCG CGGGGGTAAA AAGCTCAAGG CCGTCATCCC GGGCGGAAGC
TCCACACCGC CCCTGCGGGC CGACATGATC GACGGCGTGA CGATGGACGC CGAGTCGCTG
CGCGAGGCCG GCTCGATGAT GGGCACGGCC GGCCTGCTCG TGCTCGACGA AGACACCGAC
ATGGTCTCGT GGCTGCGACG CGTGGCGCAC TTCTACGCGC ACGAAAGCTG CGGCCAGTGC
ACGCCCTGCC GCGAGGGCAC CGGCTGGCTC GAAAACATCC TCACGCGCAT CGACGAGGGC
GAAGGCCGCC TGCGCGACCT GGACCTGCTG CTGGACCTGT GCGACCAGAT GGAAGGCCGC
ACGGTCTGCG CCCTGGCCGA CGCCGCCGCC TGGCCCGTAC GCTACACCAT CCTGCGCTTC
CGCGAAGAGT TCGAGGCCAG GTGCAAGCCC AGCCTGGTCC CGACGGGCAT CGATCTGACG
CCAACCAGCT GA
|
|---|
| Protein sequence | MATNGAQSKA GDWRNHKRVL LPPIRDLHRL EVYEAHGGYQ TLREVLTSDR WDPKSVIEEV
KKSKLRGRGG AGFPTGLKWS FMPPVDDRPR FLCCNGDESE PGTFKDRQLM EFNPHQIFEG
ILIACYAMSV RTCYLYVRGE FARWIEHMER ELEKLYAKGY VGKNIMGTDF SADIVIHKGA
GAYICGEESS LMESVEGKRA YPRIKPPFPA QRGLWGYPTT INNVETLANV PLILRNGGEW
FASIGAPNHP GPVLYGISGH VNRPGVYEYP TGMLITDLIY EVAGGIRGGK KLKAVIPGGS
STPPLRADMI DGVTMDAESL REAGSMMGTA GLLVLDEDTD MVSWLRRVAH FYAHESCGQC
TPCREGTGWL ENILTRIDEG EGRLRDLDLL LDLCDQMEGR TVCALADAAA WPVRYTILRF
REEFEARCKP SLVPTGIDLT PTS
|
|---|
| |