Gene Rmar_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2090 
Symbol 
ID8568750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2437966 
End bp2439144 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content68% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003291358 
Protein GI268317639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.30003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTTC GAATCTATCT CGACCGTCCA GGGCCTGACG GCCGCGCGCC GCTCCGACTG 
GCCCTCCTTC GCGCACGTCG CCAGTGCTGG CTGAGCCTTC CCGTGCGCGT GCGCCCTGCC
GACTGGAACC GGCGCCGCCA GCGCCTGCGG CCTTCGGCAC CGGCGGCCGC CGAGATCAAC
GCACGCCTGG AAGCCATCGT GGCCCGGGCC GAGGCGCTGC TGCTCACCGG CCAGTCGCTG
GAGGCCGTGC GCGACCGGTT GAAAGCCGAT CTGGGCCTCG TGCCTCAGGA GCACCGCCTG
CTTCCGCTCT TCGACGAATG GCTGGCCGTC AAGCGGCTCG TGCTCAAGTC TTCTTCGCTT
CAGGTGCTTG CGCGCGTGCG CAAGTATCTG GAAGCCTTCG CCGAAGACCT GACCATCGAG
CGCGTCGATC GCGCCTTTCT GGAGCGGTTT CAGGCCTTTC TGACAACCGA GCGGGGCCAG
TCGGCTGCTA CGGCCAACCG CCTGGCCAAG TACGTCCGGA CCTTCTTCCT ATGGCTTGAG
GAACGCGGCC TCCTCGAAAA GGCCCCGAAG CCGCTTCCCC TCCCCGAAGC AAAGCGCGAG
ATCATCTTTC TGACGCCTGA GGAATTGCGC GCCTTCCAGG AAGTCGATCT TTCCGGCCTT
CCGGAGGGCT ACGAGCGCGC CCGCACGATC TTCCTGCTGG CCTGCTTCAC GGGCCTTCGC
GCCTCGGACC TGAAGGCTGG CATGCGACCC GAGGCCTGGG ACACGATCGA CATGGAGGCC
GGGGTGTGGC ACCTCAGGGA GCAGAAGACC GGCATCTTCC GCCGCGTGCC GCTGGTGGAG
CCTGCCCGAC GCATTCTCCG GCGACGGCTG GAGGCCGGCG CGCCGACGCC CGTTCCGAAG
CTTTCCGAGC AGAAGGTGAA CATCTATGTC AAGGAGATTG CCGAACGCGC CGGGATTGTG
GCGCCGGTGC GGCTGGGCGA CGGGCGCGAA GTGCCCAAAT GCCAGGTGTT GAGCCTGCAC
GCCGGACGGC GGACATTCGT CAGCCTGGTG GCCCACACTT CGGGCACGGC GCCGCTGGTG
GGTCTGACGC ATGCCGACCT GGACACGCTG CAGAAGTACC TGGGCGCCTG GGACGAGTCC
CGCCGCCGGG CGCTGGAGAA GGCTTTTCGA GGGCTTTGA
 
Protein sequence
MGVRIYLDRP GPDGRAPLRL ALLRARRQCW LSLPVRVRPA DWNRRRQRLR PSAPAAAEIN 
ARLEAIVARA EALLLTGQSL EAVRDRLKAD LGLVPQEHRL LPLFDEWLAV KRLVLKSSSL
QVLARVRKYL EAFAEDLTIE RVDRAFLERF QAFLTTERGQ SAATANRLAK YVRTFFLWLE
ERGLLEKAPK PLPLPEAKRE IIFLTPEELR AFQEVDLSGL PEGYERARTI FLLACFTGLR
ASDLKAGMRP EAWDTIDMEA GVWHLREQKT GIFRRVPLVE PARRILRRRL EAGAPTPVPK
LSEQKVNIYV KEIAERAGIV APVRLGDGRE VPKCQVLSLH AGRRTFVSLV AHTSGTAPLV
GLTHADLDTL QKYLGAWDES RRRALEKAFR GL