Gene Rmar_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2000 
Symbol 
ID8568657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2331136 
End bp2331777 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID 
Productnitroreductase 
Protein accessionYP_003291269 
Protein GI268317550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.578725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGG AAGTAATTGA AATCAAAACG GCCGGGGTGG AGCCGGACGT GCACGAGTTG 
ATCCGCAGAC GCTGGAGTCC GCGCGCGTTT GCCGACCGGC CGGCAGCGCC TGACGTGCTC 
CGCCGCGTGC TGGCGGCCGC CCGCTGGGCA CCCTCGGCCT ACAACGAACA ACCGTGGCGT 
TTCATCGTGG CGCGGCGCGA GGATCCGGAG GCGTTCGATC GGCTGCTGGC CTGCCTGAAC 
GAAGGCAACC GACGCTGGGC GCAGCGGGCG CCCGTGCTGA TGCTGGTGCT GGCGCGGCGC 
ACCTTCTCGC ACAGCGGCGC GCCGAATCCG CACGCCTGGT ACGATACCGG TCAGGCCGTG 
GCCTACCTGA CGTTGCAGGC CACCGCGCTC GGACTCTACG TGCACCAGAT GGCGGGCATT 
CTTCCGGACG AAGCGCGTCG CCGCTGCGCC GTCCCGGAGG ACTACGACGT GGTGATCGCG 
CTGGCGCTGG GCTACCTGGG CGATCCGGCG CAGCTACCCG AAGACCTGCA GGCGCGCGAG 
CGGAGCCCGC GCACGCGCCG GCCGCTGACC GAGCTGGCTT TCGAAGGCCG CTGGGGCACT 
CCGGCCCGCT TTCTGATGCA GGAAGACGGC CACGCCTCCT GA
 
Protein sequence
MEMEVIEIKT AGVEPDVHEL IRRRWSPRAF ADRPAAPDVL RRVLAAARWA PSAYNEQPWR 
FIVARREDPE AFDRLLACLN EGNRRWAQRA PVLMLVLARR TFSHSGAPNP HAWYDTGQAV 
AYLTLQATAL GLYVHQMAGI LPDEARRRCA VPEDYDVVIA LALGYLGDPA QLPEDLQARE 
RSPRTRRPLT ELAFEGRWGT PARFLMQEDG HAS