| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1977 |
|---|
| Symbol | |
|---|
| ID | 8568634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 2306763 |
|---|
| End bp | 2307680 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_003291248 |
|---|
| Protein GI | 268317529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.571842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC CCACAACACC GTCGGGGCGG CCGGTGCCCG CCACCCGCTT TCAGGCGAAC
CTGAACGTTC GCTTCCCACC GCTTCCCCGC ACAGCCACCG AAGTGGCCCG CCTGCTCAGC
GACGATACGG CCGAGCCCAA CCTGGAAAAG CTGATCGAGA TCGTCCACGC CGACCCCATC
GTCACGCAGC TGGTGCTCCG ACGCATCAAC TCGGCGTACT ACGGCCTGCG GCGACGCATC
ACCGAAATCC AGAAGGCCAT CGCCCTGCTG GGCTTTCTGG AGGTCAGCAA CATCGTGTTG
ACGGCCGCCA TGCTGCAGCT GCGCGAGGCC GTCTCCAACC CCGAGCAGGA GCATATTTTC
GAGGATCTGA TGCGGCTGAG CGTCGGCGGT GCCATCTATG CGCAGCGTCT GGCGCAGTGG
CTGGGCCTCC CCTTTGCGCG TCGCGTTTTT ACTACCGGTC TGCTGCATAC CAGCGGCCGT
CTGATTCTGC TCTACAACCG GCCCGACGAC TACGAAGCGC TCTGGTACAC GAACGAAGAA
GGAGCCCTGC CGTCGGCCGA CGCCGAACGC ACGATCTTCG GGGTCAGCTA TCTGGAGTTG
AACGAGCAGG CGGCGAAGGA GTGGAATTTG CCCGAGGAAC TGGGAGTGGT GCTGGGGAAA
CTGGAGACGC CCAAAGAACT GTCGACACCC GAACTGAAAA CCCAGGCGGC CCTGGTGGCT
ACCGGAAGCG CTGTGGCCGA GCAACTCCAC CTGGCACACA GCGAAACCGT CCTGCTTCCC
GAACAGGCCC GTCTATTGCT GGGTTATACC CTTACCGAAG CGCAGATCGT CGAGCGGCTC
CAGGCCGAAC GCGACGACGT GGAACGCTAC CTCCATATGT TGCTGAAAGG AAACGGGCAC
GGAAACGACG AAGCCTAA
|
|---|
| Protein sequence | MQNPTTPSGR PVPATRFQAN LNVRFPPLPR TATEVARLLS DDTAEPNLEK LIEIVHADPI
VTQLVLRRIN SAYYGLRRRI TEIQKAIALL GFLEVSNIVL TAAMLQLREA VSNPEQEHIF
EDLMRLSVGG AIYAQRLAQW LGLPFARRVF TTGLLHTSGR LILLYNRPDD YEALWYTNEE
GALPSADAER TIFGVSYLEL NEQAAKEWNL PEELGVVLGK LETPKELSTP ELKTQAALVA
TGSAVAEQLH LAHSETVLLP EQARLLLGYT LTEAQIVERL QAERDDVERY LHMLLKGNGH
GNDEA
|
|---|
| |