| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1963 |
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| Symbol | |
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| ID | 8568620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 2289473 |
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| End bp | 2291296 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003291234 |
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| Protein GI | 268317515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGAC GTCCTGCGCG CACGTTTCAT CTGGCCGCGT TGCTGCTGGC GCTGAGCACC
GCGTCCCGTG CGCAGGCGCC CGACAGCCTG CTCATGGTAC GCTACCGCAC CGCCGAACAA
CTGCTCCGCA GCGGCCAGTA CCAGCAGGCC CTCCCCCTGC TGGAGTCGCT CTACCGGGAG
CGCCCCGATG TTTACGTTTT CTACGACCGG CTCAAGCAGG TCTACGAAAA CCTCAAACGC
TACGACGATG CGTTGCGCCT GATCGAATCG CGGCTGGATG CGCGCGCGCC CAATCCGGCG
CTGCTGGCCG AAAAGGGCCG GCTGCTCTAC CTGAAAGGCG ACGAAGCAGG TGCAGAAGCA
GCCTGGGAAG CGGCCATCCA GGCGGCCCCG CAGCAGAGCG GCACCTACCG CGTGGTCTAT
CAGACGCTGC TCGAGCTGCG ACGCTTCGAC GAGGCCATTC GCGTACTGGA GCGCGCCCGG
CGCACGCTTG CCAACCCCTC GGTATTCCTG CTGGACCTGG CCTACCTCTA CAGTCTCGAT
GGCCGCTACG AAGAGGCCAT GGAGTCTTAC CGGGAATTTC TGCAGCAGGA CGCCCGCCGG
CTGGGCTTCG TGCAGACGCG CCTGGAGCCC TTCATGGACG AAGCGGCCGC CCGCGAGGCC
GGCATTGCCG TCTTCGAGCG GGCCGTCCGT CGCGAGCCGC TGAACCCGGC CTTCCGCCAG
ATGCTGGCCT GGCTCTACCT GCGCAACGGC GACTACGACC GGGCGCTGGA CGTGTACCGG
GCGCTGGATC GATTGCAGCA GGCGCAGGGC CAGCTCCTGC TGCAATTCGC CCTGCAGGCC
CGTGACGCAG GCGCCCTCGA CGCAGCCCGC GCCGCGCTGG AGGACATCCT GCGACAATCC
GGCGCTTCTG TGCTCCCGGA GGCGCACTAC GAACTGGGCC TCCTCTACGA GCAGCAGGCG
CACGACGGCG ATACGACGGC TGCCCGCCTG GCCCGCCACA TGTATCGAGA TTTCCTGACC
GCCTTCCCCG GTCATCCACT CGTTCCGGAC GCCCTCTACC GGCTGGCGCG ACTGGAGCTG
GACGTGCTGT ACCACCCGCA GGCCGCCGAC TCGCTCCTGG CGGTGCTGCT GGACCGCTAC
GCCGACCACG AGGTGGCCTG GCAGGCCCGC TTCGATCAGG GCCGGCTGGC GCTGCAGGCC
GGCGACCTGA GCGCCGCGCG CCTGGCCTTC CTGCGGCTGC TCGACGCGCG CCGCACCGGC
CCGCTGGCCG AAGCCGCCCG CTACCAGCTT GCCCTGCTCG ACTTCTACGA CGGTGCCTTC
GAGGCGGCCC TTGCGCAGCT CGACATCCTC GTCGAAGATG CCGCTTCCGA CGTGGCCAAC
GATGCACTCA CACTCCGCCT GCTCATCCAG GAAAACCGCG GCCCGGACTC GCTCGACACT
CCGCTCCGGC GCTACGCACA GGCCCGACTC CTGATGGCTC AGAACCAACC CGAAGCGGCG
CTCGATTCGC TGAACGTGCT GCAACAGGAC GTGGGCGCGC ACCCGATCGC CGACGACGTG
ACGCTGCTGC GGGCCCGCCT GCTCCGCCGG CTGGGACGTC CCACCGAAGC CCTCGCGCTT
CTGCTCGAAT TTCCCCTGCG CTACCCCCGG AGCCCGCTAC GCGACCAGAG CCTCTACGAG
GCGGCCCGCA TCCAGGAAGA GGACCTGCGC GACCATGCGG CCGCCCTCGA CACCTACACG
CGCCTGCTGA CGGAATTTCC TGGATCGCCC CTGATTCCGG AAGTACGTAC GCGCATTCGC
AACCTTCGCG GAGAAGACGC CTGA
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| Protein sequence | MRRRPARTFH LAALLLALST ASRAQAPDSL LMVRYRTAEQ LLRSGQYQQA LPLLESLYRE
RPDVYVFYDR LKQVYENLKR YDDALRLIES RLDARAPNPA LLAEKGRLLY LKGDEAGAEA
AWEAAIQAAP QQSGTYRVVY QTLLELRRFD EAIRVLERAR RTLANPSVFL LDLAYLYSLD
GRYEEAMESY REFLQQDARR LGFVQTRLEP FMDEAAAREA GIAVFERAVR REPLNPAFRQ
MLAWLYLRNG DYDRALDVYR ALDRLQQAQG QLLLQFALQA RDAGALDAAR AALEDILRQS
GASVLPEAHY ELGLLYEQQA HDGDTTAARL ARHMYRDFLT AFPGHPLVPD ALYRLARLEL
DVLYHPQAAD SLLAVLLDRY ADHEVAWQAR FDQGRLALQA GDLSAARLAF LRLLDARRTG
PLAEAARYQL ALLDFYDGAF EAALAQLDIL VEDAASDVAN DALTLRLLIQ ENRGPDSLDT
PLRRYAQARL LMAQNQPEAA LDSLNVLQQD VGAHPIADDV TLLRARLLRR LGRPTEALAL
LLEFPLRYPR SPLRDQSLYE AARIQEEDLR DHAAALDTYT RLLTEFPGSP LIPEVRTRIR
NLRGEDA
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