Gene Rmar_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1958 
Symbol 
ID8568615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2282826 
End bp2283359 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003291229 
Protein GI268317510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.402878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCA AACTGGGAAT CTTGCTGCTG GGGACGCTGT GCCTGACCGG CGTGGGCCTG 
GCGCAGCACC GCATCGGGTA CGTGGACACC GAGTACATCC TGAGCAAGTT GCCTGAGTAC 
CAGGCGGTTC AGCAGAAGCT GGACCAGATG GTGCGCGACT GGCAGGCCGA GCTGGACCGG 
CGCCGCCAGG AGATCGACCG CATGTTCGAG GAATACCAGA CCCGCGAGCT GCTCTACACG 
CCGGAAGAGC GGCAGCGCCG CCGTGAGGAG ATCGTGCGCG CCGAAGAGGA GCTGGAGCGC 
CTGCGGCAAC AGTACTTCGG ACCGGAAGGG GAGCTGTTTC GCCAGCAGGA GGCCCTGCTG 
CGTCCCATCC AGGAGCGGGT GCTGGAGGCG ATCGAGACCG TGGCCCGTGA TGAAGGGTAC 
GACTATGTGC TCGACAAAGC CGCAGCCCCC ATGCTGCTGT ATGCCCCACC GGAACATGAC 
CTGAGCGATC GGGTTCTCGC CGAGCTTAAC GTAAACCTCG AGTCGCAGAA CTGA
 
Protein sequence
MPRKLGILLL GTLCLTGVGL AQHRIGYVDT EYILSKLPEY QAVQQKLDQM VRDWQAELDR 
RRQEIDRMFE EYQTRELLYT PEERQRRREE IVRAEEELER LRQQYFGPEG ELFRQQEALL 
RPIQERVLEA IETVARDEGY DYVLDKAAAP MLLYAPPEHD LSDRVLAELN VNLESQN