Gene Rmar_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1957 
Symbol 
ID8568614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2282237 
End bp2282800 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003291228 
Protein GI268317509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.396318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATC GTCGTGTTGC CCTCAAAGCG CTGATCGGTG CCGTTTTCAT GCTGGGCCTG 
CTGAAGGCTG AAGTCAGTCC GGCGCAATCG TTGCGCATCG GGTACACCGA TCCCGATGTG 
ATCATCGTCA ACATGAAGGA ATATCGGGAC ATTCAGCAGC AGCTCCAGAA GGAAGCGCAG 
GAAAGCCAGC AGGCGCTGCA GGAGATGTTT AACGAGTATC AGGAGAAACT GGAACGTTAC 
CAGCGGCAGC AGGCGCTGCT TTCTGAACAG CGGCGCCAGG AGCGGGAGCA GGAGCTGTTG 
CAACTCCAGC AGCAGATCCA GGAGGCTTCG GCCCTCCGAC AGCAGCAGCT GGCCCAGCGC 
GAGGCCGAGC TGATGCAGCC GCTGCTGGAA CGCGTGCAGC AGGTGATCGA CCAGGTGGCG 
CAGGAGCAGA ACCTGGACGT CGTGCTGCGG GCACAGGCGC TGCTGTACGT GAAAGAAGGG 
CGCGTGGTGG ACATCACGCG CGAGGTGGCC CGGCGGCTGG GGATTCAGGT GCCCGAAGAC 
ACCACGGCCA CGCAGCAGAA CTGA
 
Protein sequence
MRNRRVALKA LIGAVFMLGL LKAEVSPAQS LRIGYTDPDV IIVNMKEYRD IQQQLQKEAQ 
ESQQALQEMF NEYQEKLERY QRQQALLSEQ RRQEREQELL QLQQQIQEAS ALRQQQLAQR 
EAELMQPLLE RVQQVIDQVA QEQNLDVVLR AQALLYVKEG RVVDITREVA RRLGIQVPED 
TTATQQN