Gene Rmar_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1933 
Symbol 
ID8568589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2256030 
End bp2257112 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291204 
Protein GI268317485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.235318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTCT CCCCACAGGC TCCCTCCCCG AACGGCCGGG CGCCCTCGCC CTGGCGGGCC 
CGTCTGCTGG GTTCGGTGGC ATTGAGCCTG GTAGTGCTGG GCGTCGTCAC CTATTTTACG
TTCGACTGGA AGGCCTTTGT CGAGGCGCTC AACGAGGTCA ATCCGCTGCT GCTGACGCTG
GGCATCGGGA CGCTGGGTCT GCGCGTGCTC TTTGGCGCCT GGCGGCTGCA CTACGTCTCG
CATCGGCACC TGACGCTCCG AGCGGCCGCC CGCTGCCAGC TCGTGTGGGA CTTTTCGTCG
AACGTGACGC CTTCGGCCAT CGGCGGCGGC CCGTTCGCCG CGCTGTTCAT CGCCCGGGAT
CAGCGCCTGC CCCTCGGCGA AGCCACTGCC ATTCTGCTGT TCGCCATCCT GCTCGATCAG
CTTTTCTTTG CCTTCACCAT CGTGCTGATC CTCGTGGCCC TGCCTTTCAT GCCCGTCCTG
CCCTCGGCCA TGGGCACGGT GGGCGGCGGC ACGTTCGTGC TCTACCTGGG CCTCGGGCTG
GGCTGGGTGG CCTTTTTCGC CTACACCACG TTTTTCCGGC CGGAGCTGAT CGAACGCCTG
GCCCGGCGCA TCCTTCGCTT CCGGCGGCTG CGTCGGTTTC GTGAGCGTGT CATCCAGGAG
CTGCTCAGCC TGCAGGAACG CACACAGCTC ATCCGCTCCC AGCCGCCCGG TTTCTTCCTG
AAGGGTTTCC TGCTGACCAC GGCGGCCTGG ATCAGCCGTC ATCTGCTGCT CGTTTTTCTG
GTGTGGAGCG TCTATCCCGA GGCCGACGCC GTGCTCGTCT TCATGCGCAC GCTGGCCATG
ACGCTGGGAT CGGTCATTCT GCCCACGCCG GGCGGTTCCG GCGGCGTCGA GGGACTCTAC
GTGCTGTTCA TCGGCCCGCT CATGCCCCGT CACTTCGTGG CACCCACGCT GCTGCTCTGG
CGCCTGCTCA GCTACTACGT GTTCATCGCG ATCGGGCTGT TCCTGACGGG CCACCACATG
CAGCGGAGCC TGCGTCGGCG TCGCCAGTTG CGTCCGGCCC CGGAACCCGC CGAAGAGTCA
TGA
 
Protein sequence
MSLSPQAPSP NGRAPSPWRA RLLGSVALSL VVLGVVTYFT FDWKAFVEAL NEVNPLLLTL 
GIGTLGLRVL FGAWRLHYVS HRHLTLRAAA RCQLVWDFSS NVTPSAIGGG PFAALFIARD
QRLPLGEATA ILLFAILLDQ LFFAFTIVLI LVALPFMPVL PSAMGTVGGG TFVLYLGLGL
GWVAFFAYTT FFRPELIERL ARRILRFRRL RRFRERVIQE LLSLQERTQL IRSQPPGFFL
KGFLLTTAAW ISRHLLLVFL VWSVYPEADA VLVFMRTLAM TLGSVILPTP GGSGGVEGLY
VLFIGPLMPR HFVAPTLLLW RLLSYYVFIA IGLFLTGHHM QRSLRRRRQL RPAPEPAEES