Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1896 |
Symbol | |
ID | 8568550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2217113 |
End bp | 2218918 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | oligoendopeptidase, pepF/M3 family |
Protein accession | YP_003291167 |
Protein GI | 268317448 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCG GAGCCGAGAA CGTTCGCTGG GATCTGACCG ATCTGTACCC GGATGAGGCT GCGTTGAAGC AGGATCTGGA GCAGGCGCTG GCCGAAGCCG AGGCATTTGC CCGAACCTAT CACGGTCGGA TTGGCTCGCT GGAGGCCGAG GAACTGGCCG AAGCATTGCG CCGCTACGAG GCGATTCTGG ACCGGCTGGG CCGCGCCTAC ACCTACGCCT ACCTGCACTG GAGCACCAAT ACGGAGGATC CGGCCCGTGG TGCGCTCTTG CAGCATGTGC GGGAGCGCTA TACGCAGGCT TCTCAGCAAC TGCTGTTTCT GGAGCTGGAA TGGGCGGCCG TCGAGCCGGA ACGTGCCCGC CAGCTCATGG AGACCGAGGC GCTGCGACCT TACCGGCACT ACCTGGAGCT GCAGCAGCGG TTGCGTCCGC ACCTGCTCAG CGAGCCGGAA GAAAAGATTC TCGCCGAAAA GCGCGTTACC GGTCGTGATG CCTGGACCCG GTTCTTCGAT GAGCTCCTCG GCAGCCTGCG CTTTGAACTG AACGGCCAGC TGCTGACCGA GCAGGAGGTG CTGGCCAAAC TGTACGACCC GGACCGGGAG GTGCGGCGGC AGGCGGCGCT GGCCTTTACG GAAGGGCTCA AGCCACGCAT TCGCGAGCTG ACCTACATCT TCAACACGGT GCTGGCCGAC AAAGCCTCGG ACGACCGCCT GCGTGGCTAC CGGACCTGGA TCGAGAGCCG CAACCTGGCC AACGAGGTCA GCGACGAAAT GGTCGAGGCG CTGATCCGGG CGGTGACCGC GCGCTACGAC CTGGTAGCCC GTTTCTACGA GCTCAAGCGA CGGTTGCTGG GGCTGGATGA ACTGTACGAC TACGACCGTT ACGCGCCGCT GAAGGAGGCC GGCACGCGCT ATCGCTGGGA GGAAGCCCGC CAGCTGGTCG AGGAAGCCTA CCGGGCCTTT CATCCGCGCA TGGGAGAAAT TGCGGCACAG TTCTTCGAAC GTCGCTGGAT CGATGCGGCC ATGACGCCGG GCAAGCGCAG CGGGGCATTC AGCCATGGGG CCGTGCCGAG CGCCCATCCG TATATCCTGC TCAACTATAC CGGCACGATC CGTGACGTGC AAACGCTGGC GCACGAACTG GGCCATGGCG TGCACCAGTA CCTGTCGCGC AAGCAGGGCA TTCTCCAGGC CGACACACCG CTTACCACGG CCGAGACGGC CTCTGTCTTT GGCGAGATGC TGGTTTTCGA GCGGTTGCTG GCGGCCGAGG CCGACCCGTC CAACCGGCTG GCCATGCTGA TGGGCAAAAT CGACGATACG ATGGCCACGG TTTTCCGCCA GGTGGCCATG AATCGCTTCG AAGACCGCAT GCACAACGCC CGGCGCCAGC AGGGCGAGCT TCCCACGGAA GCGTTCTGCG ATTTCTGGAT CGAGACGCAG CAGGACATGT TTCGCGGGAG TGTGGTGCTC GGCGATCACT ATCGCTACTG GTGGAGCTAC ATCCCGCACT TCATTCACAC GCCGGGCTAC GTGTACGCCT ATGCATTCGG CGAGCTGCTG GTGCTGGCGC TTTTTGCGCG CTACCGGCAG GAAGGCCCCG ACTTTGCCGA GCGCTATCTG CAACTGCTCG AAGCCGGCGG CTCGGACTGG CCGCACGTGC TGGTAGGTCG GCTGGGTGTC GATCTGACCG ACCCGCAGTT CTGGCATGAA GGCCTGCAGG CGATCGAGGA ACTCATCGCG CAGGCCGAGG CGCTCGCGGC TCAGGCCATG CAGGATTCGC AGCCGATGCC CGCCCGCTCC GGGTAG
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Protein sequence | MQTGAENVRW DLTDLYPDEA ALKQDLEQAL AEAEAFARTY HGRIGSLEAE ELAEALRRYE AILDRLGRAY TYAYLHWSTN TEDPARGALL QHVRERYTQA SQQLLFLELE WAAVEPERAR QLMETEALRP YRHYLELQQR LRPHLLSEPE EKILAEKRVT GRDAWTRFFD ELLGSLRFEL NGQLLTEQEV LAKLYDPDRE VRRQAALAFT EGLKPRIREL TYIFNTVLAD KASDDRLRGY RTWIESRNLA NEVSDEMVEA LIRAVTARYD LVARFYELKR RLLGLDELYD YDRYAPLKEA GTRYRWEEAR QLVEEAYRAF HPRMGEIAAQ FFERRWIDAA MTPGKRSGAF SHGAVPSAHP YILLNYTGTI RDVQTLAHEL GHGVHQYLSR KQGILQADTP LTTAETASVF GEMLVFERLL AAEADPSNRL AMLMGKIDDT MATVFRQVAM NRFEDRMHNA RRQQGELPTE AFCDFWIETQ QDMFRGSVVL GDHYRYWWSY IPHFIHTPGY VYAYAFGELL VLALFARYRQ EGPDFAERYL QLLEAGGSDW PHVLVGRLGV DLTDPQFWHE GLQAIEELIA QAEALAAQAM QDSQPMPARS G
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