Gene Rmar_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1890 
Symbol 
ID8568544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2209674 
End bp2210390 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionYP_003291161 
Protein GI268317442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTG AGGTGGTTTA TCTGCTCCGG GTGGAAACGA CCGAGTCGGA CCCCTTTGCC 
GAAGCGCTGC GGGCAGCGGG CTACCGGCCG TTCGTGCTGC CGGTGCTGTC GGTGGTCTGG 
TGCAACACCG AGCAACTCCG GGCGGTGCTG GCCCGGTCGG AGGCATACGG CGGGTTGATT 
TTCACCAGCC CGCGCGCCGT GGAGGCCGTC CGGCGCCTGG GATCGCTCCC GGAGGCCTGG 
CGCCGACGGC CCGTGTACGT GGTAGGGCCG CGCACGGCCG CCGCCGCGCA GGCACTGGGG 
CTGCAGCCCC GGGGCGAAGC GGCCGGCTCC GGGCGCGAGC TGGCCCGGCT GATCCTGCAG 
GCACCGCGTC CAGAGCGTCC GCTGCTGTTT CTGTGCGGCG CGCGTCGCCG CGACGAACTG 
CCGGCGCTGC TTCGCGCCGC CGCGTTCCCG CTGGAAGAAC TGGTCGTGTA CGACACCCGA 
CCGTCCGTGC CCGAACTGCC CGCCGAGGTG CCCGACTGGG TCGTATTTTT CAGTCCGTCC 
GGTCTGGAAG CCGCCCGACG GCTTCCGATC GCCCGGGAGC GGGTGCGAGT GGCCGCCATC 
GGTCCCACGA CGGCCGCAGC GCTGCAGCAG GAAGGCTGGC CGGTGGCCGC CGTGGCCCGG 
ACGCCCACGC CGGAAGGCTT GCTGGCCGCG ATGCAGGAAG CAACCAACCT GTCATGA
 
Protein sequence
MAGEVVYLLR VETTESDPFA EALRAAGYRP FVLPVLSVVW CNTEQLRAVL ARSEAYGGLI 
FTSPRAVEAV RRLGSLPEAW RRRPVYVVGP RTAAAAQALG LQPRGEAAGS GRELARLILQ 
APRPERPLLF LCGARRRDEL PALLRAAAFP LEELVVYDTR PSVPELPAEV PDWVVFFSPS 
GLEAARRLPI ARERVRVAAI GPTTAAALQQ EGWPVAAVAR TPTPEGLLAA MQEATNLS