Gene Rmar_1830 details

Gene Information

• Locus tag: Rmar_1830
• ID: 8568482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 2138133
• End bp: 2140124
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 66%
• Product: peptidase
• Protein accession: YP_003291101
• Protein GI: 268317382

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.932627
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGTC TGTCGCTGGT ATTGTTGTTT CTGCTGGCCG GCTGCACCGC TTCGCGCCCG 
ATCGAGCAGG CTCCGGAAGC CCCTACACCC GCGTTTGTAC GCCCGGAGCG TCCGCTACCT 
GCGCCCATCA CGCTGCCCCC TTCTTTTGAA GCGGCCATCG AACGGGGCAC GCGCACCATG 
GACGGACGCC CCGGACCGAA CTACTGGCAG CAGTACGCCC GCTACGACCT GACCGCCCGC 
ATCGACACGG CCGCGCGGCG GCTGGACGGC GAGGGGCGGA TCGTGTATCT GAACCGCTCG 
CCCGACGTGC TTCGCCAGCT CTTTCTGGAG CTTCCGCTGA ACGTCCACGC CGAAGGCGTC 
GTGCGCAACG AACCGGCCGA GGTAACCGGT GGCGTCACGC TTCACTACGT GGCCGTCGAA 
GGCCAGGAAG CCCTGCATCC GGCCGAAGCA CCCGCCGGTG CGCCGCGCTA CGCGGTCAAC 
GGCACACGGA TGATCATCTT TCTGCAGCGC GATCTGGCGC CCGGCGACTC CGTCCGGCTC 
GACTTCCGCT GGTCCTTTAC GATTCCCAAA CGCGGTGCCG GGGGCCGCAT GGGCTACGAC 
GAGAACCTGT TTTTCCTGGC CTACTGGTAC CCCCACATGG CCGTCTATGA CGACGTGATC 
GGCTGGTTCA CCGATTCGTT CCTGAGCCGC GCCGAGTTCT ACTTCGGCTA TGGCGACTAC 
CGGATCACGA TCGACGCACC GGCCGGCTGG CTCGTGATGG CCACCGGCAC CTTCGAAAAT 
CCCGAAGAAG TGCTGGCCCC CGACGTGCTG GCCCGCATGC GTCAGGCCTA TGCCAGCGAC 
ACGCCGGTTC GCATCGCCGA ACCCGACACG GATCCGGTCA CGCTTCCGGG CACCGACGGC 
CGTCTGCAGT GGCGCTTCCG GGCCACGAAC GTGCGCGACG TGGCCTTCAG TCTGGTGCAT 
CGCGGCTACT GGGAAGGTGC CCGCACGCCC GTGGGCGACC GCGACGGCGA CGGACAGACC 
GACTACGCGC AGATCAACAC GTTCTGGCGC CCGACCGCGC CCCGCTGGGC CAACGTCACG 
CGCTACCAGC AGCATGCCAT CAGCTACCTC TCGCGCCTGA CCGGCTTTCC CTATCCCTGG 
CCGCACATGA CGGCCGTCGA AGGCGGCGGC ATCATCGGCG GCGGCATGGA ATTTCCCATG 
ATGACGCTCA TCGGCGACTA CAACGCCGCC GGCGACAGCG CCCTCTATTA CGTGACGGCG 
CACGAACTGG CCCACATGTG GATTCCCATG ATCGTCGGTC CCAACGAGCG CCGCTATAGC 
TGGATGGACG AAGGCAGCAC CACGTTTGCC GAAAACCATG CGCGCACCGA TTTCTTCCCC 
GGCACCCAAC CCCGGCTGAG CGAGCAGGAA AGCTATCTGA TGCTGGCCCG CATGGGCGCC 
GAAGGGGAAA TCATGCGCTG GTCCGACTAC CACTACTCCA GCTTCGCTTT CGGCATCGCC 
TCCTACAGCA AGCCGGCCAC GCTGCTCGAA GCGCTCCGAG GGCTGCTGGG CGAAGACGTG 
TTCTGGCGCG CCTACCGCAC GTTCATCCGC GAGTGGGCCT TCAAGCACCC CTACCCTTAC 
GACCTGTTCA ACACGTTCGA GCGCGTGAGC GGACGTGATC TCGGCTGGTT CTGGCACGCC 
TGGTACTTCG AGACGTGGAC GCTCGATCAG GCCGTGGCGG CCGTCGAACC CATCGAAGGC 
GGCGTGCGCA TCACGGTGGA AGACCACGGA CTGGCCCCCA TGCCGGTCTA CCTGACGCTC 
ACGCTGGCCG ACGGCTCGCA GGTGCGCGAT ACGATCGACG TGGACGTGTG GCTGGAAGGA 
CGGCGGCAGG TGACCGTCAC GGTGCCGACC GGCGCCGCCG TTACCCGCGT CGAAATCGAC 
CCCGAGCGCT GGTTCCCCGA CATCGACCGC ACGAACAACG TCTGGCGCGC ACCGGCCGGC 
ACCGGACAGT AA 

 

Protein sequence

MRRLSLVLLF LLAGCTASRP IEQAPEAPTP AFVRPERPLP APITLPPSFE AAIERGTRTM 
DGRPGPNYWQ QYARYDLTAR IDTAARRLDG EGRIVYLNRS PDVLRQLFLE LPLNVHAEGV 
VRNEPAEVTG GVTLHYVAVE GQEALHPAEA PAGAPRYAVN GTRMIIFLQR DLAPGDSVRL 
DFRWSFTIPK RGAGGRMGYD ENLFFLAYWY PHMAVYDDVI GWFTDSFLSR AEFYFGYGDY 
RITIDAPAGW LVMATGTFEN PEEVLAPDVL ARMRQAYASD TPVRIAEPDT DPVTLPGTDG 
RLQWRFRATN VRDVAFSLVH RGYWEGARTP VGDRDGDGQT DYAQINTFWR PTAPRWANVT 
RYQQHAISYL SRLTGFPYPW PHMTAVEGGG IIGGGMEFPM MTLIGDYNAA GDSALYYVTA 
HELAHMWIPM IVGPNERRYS WMDEGSTTFA ENHARTDFFP GTQPRLSEQE SYLMLARMGA 
EGEIMRWSDY HYSSFAFGIA SYSKPATLLE ALRGLLGEDV FWRAYRTFIR EWAFKHPYPY 
DLFNTFERVS GRDLGWFWHA WYFETWTLDQ AVAAVEPIEG GVRITVEDHG LAPMPVYLTL 
TLADGSQVRD TIDVDVWLEG RRQVTVTVPT GAAVTRVEID PERWFPDIDR TNNVWRAPAG 
TGQ