Gene Rmar_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1793 
Symbol 
ID8568445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2101221 
End bp2101862 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID 
Productpeptidase S16 lon domain protein 
Protein accessionYP_003291065 
Protein GI268317346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCG AACGCTTACC GCTTTTTCCA CTGGAGGTGG TGCTGTATCC CGGCGAGCAG 
CTCCCGTTGC ACATTTTCGA GCCCCGCTAC CGCAGGCTGG TGACGCGTTG TCTGGAAGAG 
GACCGGCCGT TCGGCATCGT GCTGGCCGAA GCCAGCAAGC TGGCCCAGGT GGGGTCGCTG 
GCCCGCATCA CGCGCGTGCT GGCCCGCTAC GGCGACGGCC GCATGGACAT CCTGGTGACC 
GGAGAAGATC GCTTTCGGAT CGTGCAGCTC TACTCCGACG AGCCCTACCT GACGGCCGAC 
GTCGAGCGCA TCGTCGAACC CTGGGAGGTT CCGGAGCGTG CGTTGCGCGA GCGGCTGATC 
ACCCAGCACA TGCGGCTGCT GGAGCTGGTC GGCCGCACCG TACGCCCCTC GCTTTACGAG 
AACGTGCGCT ATCTGTCGTA CGTGATCGCG CCGAACGCCG GACTGACCGT GCAGCAGCAA 
CAGGAGGTGC TGGAACTGCT CACAGAAAAC GAGCGCGTGG CGTATCTTGT ATCGCACCTG 
GAGCGGCTCT TGCCGCAGGT CGAGCAGATG GAGGCCGTGC GGCGACGTGT GCAGTCGAAC 
GGCCATTTTC CTGAGGGGCA TTCATCCAGT TCTTCAAAGT AA
 
Protein sequence
MRIERLPLFP LEVVLYPGEQ LPLHIFEPRY RRLVTRCLEE DRPFGIVLAE ASKLAQVGSL 
ARITRVLARY GDGRMDILVT GEDRFRIVQL YSDEPYLTAD VERIVEPWEV PERALRERLI 
TQHMRLLELV GRTVRPSLYE NVRYLSYVIA PNAGLTVQQQ QEVLELLTEN ERVAYLVSHL 
ERLLPQVEQM EAVRRRVQSN GHFPEGHSSS SSK