Gene Rmar_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1782 
Symbol 
ID8568434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2088147 
End bp2089241 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003291054 
Protein GI268317335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.926199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG TGCTCGCTTT TCTGCGGAAA GAGTTTCGCC AGTTGCGGCG CGATCCGCGC 
ATGCTGTTTC TGCTGATCGT GCCGCCGATC GTGCAGCTCG TGCTGCTGGG CTATGCGGCC
AACCTGGACG TGCGACACGT GCCGCTCGTC GTGTGCGATC CGGTGCCCTC GGCCACCAGC
CGCGACCTCG TCCAGCGGCT GGTAGCCAGC ACCTACTTCG ACCTTGTCGG CTACGAGCCC
GACGCGCGGC GCGTCGGCGA ATGGCTCGAC CGCGGGGAGG CCACCGTGGC GCTGGTCTTC
CCGCCCGACT TCGGGAAAGC CGTGGCGCAG GGCGCCACGG CCTCGGTCCA GCTGCTGGTG
GACGGCAGCG AGACGAACAC GGCCACCGTC GCCCTGAGCT ATGCGTCGCA GATCATCCAG
CACGCCCTCG GTGTCGGTGC CGTTTCGGCC GGAGTCGTGC CCGAGCTGCG CGTGTGGTTC
AACCCGGCGC TCTCCAGCCG CTGGTTCATC ATCCCCGGGC TGGTGGGTCT GTTGCTGACC
GTGATGACCA CCGTGCTGAC GGCGCTGGCG CTGGTGAAGG AAAAAGAGAC GGGCACGCTG
GAACAACTGC TGGTGACGCC GCTGCGTCCG GCCACCGTGC TGCTGGGCAA GCTCGTACCG
TTTCTGCTGA TCGGGCTACT GGACGTGCTG CTGGTAGTGC TGGTGGCGAC GCTGTGGTTT
CAGGTGCCGC TGCGCGGTAG CGTTCCCCTG CTGTTCGGTA GCGCGTTGCT TTTTCTGCTC
AACACACTGG GGCTCGGGCT GCTCATCTCC ACGCTGAGCC GCACGCAGCA GCAGGCGCTC
ATCGGTGCCG CCTTTTTCGC GCTCATGCCC ATGATCATCC TTTCCGGCTT CGTCTTCCCC
ATCGAGAGCA TGCCGCCCGT GATCCGGGCT GTCACCTACA TCGTACCCCT GCGCTACTTT
CTGACCATCG TGCGGGGCAT TTTCCTGAAA GGCGTGGGCA TGCCGGCGCT CTGGGAGGAG
ATGCTGGCGC TGCTCGTGCT GGGGTTGCTC CTGTTTGGCC TGAGCACCTG GCGCTTCCGC
CGCCAGCTGC ATTGA
 
Protein sequence
MEQVLAFLRK EFRQLRRDPR MLFLLIVPPI VQLVLLGYAA NLDVRHVPLV VCDPVPSATS 
RDLVQRLVAS TYFDLVGYEP DARRVGEWLD RGEATVALVF PPDFGKAVAQ GATASVQLLV
DGSETNTATV ALSYASQIIQ HALGVGAVSA GVVPELRVWF NPALSSRWFI IPGLVGLLLT
VMTTVLTALA LVKEKETGTL EQLLVTPLRP ATVLLGKLVP FLLIGLLDVL LVVLVATLWF
QVPLRGSVPL LFGSALLFLL NTLGLGLLIS TLSRTQQQAL IGAAFFALMP MIILSGFVFP
IESMPPVIRA VTYIVPLRYF LTIVRGIFLK GVGMPALWEE MLALLVLGLL LFGLSTWRFR
RQLH