Gene Rmar_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1709 
Symbol 
ID8568361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1983170 
End bp1983793 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003290983 
Protein GI268317264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.17641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA CCGGATCGGA CGGTACGTTG CGGCGACGTA TTCTCGATGC CGCGCGCCAC 
CTGCTGGTGG CTGAGGGCTA CACGAGTCTC TCCATGCGCA AAATTGCGCG GGCGATCGGC 
TGCAGTCCGA CGGCCATCTA CCTGTACTTC CAGAACAAGG ATGCGCTGGT GCACACGTTG 
ATCGACGAGG GCTTCGGACT GCTCTACGAG GAGCTGCGGG AAGAGGCGGC CCGTCACGAT 
GATCCGGTGG CCCGGTTGGA GGCGCTCTGG CGGCGCTACG TGGTCTTCGG GCGCAGCAAT 
CCGGAATACT ACGAGATCAT GTTCATGCTG CATCCGGAGC GCATGGAGCG GTACCCGCCG 
GAAAAATATC GCCGGGCACG TCGTGGCCTG GAGCTTTCCA TTCAGACGCT GGAAGAAGGC 
CGTCGGCTGG GCGTGTTTAC CGTCGAGGAT CCGCGCGTGA CGGCCAGCGC GGCCTGGGCG 
GCGCTTCACG GAGCTGTGGC GTTGCTGCTG GCGCGTCGTT TGGATGTACG GATCGATCCG 
GAAGCCTTCA TCGACACGAC CATTCGGACG CTGCTGCGCG GGGTGCTGGC CCCTGAGGCC 
CTGCCGCAGA TGGCTGCAAA ATAG
 
Protein sequence
MTETGSDGTL RRRILDAARH LLVAEGYTSL SMRKIARAIG CSPTAIYLYF QNKDALVHTL 
IDEGFGLLYE ELREEAARHD DPVARLEALW RRYVVFGRSN PEYYEIMFML HPERMERYPP 
EKYRRARRGL ELSIQTLEEG RRLGVFTVED PRVTASAAWA ALHGAVALLL ARRLDVRIDP 
EAFIDTTIRT LLRGVLAPEA LPQMAAK