Gene Rmar_1623 details

Gene Information

• Locus tag: Rmar_1623
• ID: 8568275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1878292
• End bp: 1879059
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 67%
• Product: protein of unknown function DUF1080
• Protein accession: YP_003290897
• Protein GI: 268317178

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACGGG CCATGCGACG GATCATCCTG CTGGCAACGC TGTGGATCAT CAACGGAGGG 
ATCACGAAAA CCATGGCGCA GATCGACACG ACGTGGGCTA TCCACGACAT GAACCGGCCG 
CGGCCGCCGG TGGTGACGCC GGCGCCGTTC GATCGGCCGA CGGCCCCGCC CTCGGACGCC 
ATCGTGCTGT TCGACGGCAC GGACCTGTCG GCCTGGGAAC GGGTCGGCGG TGGACCGGCC 
GGCTGGCGTG TGGTGGACGG TTACATGGAA GTGGTGCCCG GTAGCGGCAA CATCCAGACC 
CGTCAGGGCT TCGGCGACGT GCAGCTCCAT CTGGAGTGGT CGGTGCCCGA GGACGTGACG 
GGCGAAGGGC AGGGGCGCGG CAACAGTGGC GTCTTCCTGA TGGGGCGCTA CGAGGTGCAG 
GTACTCGACT CCTATCAGAA CGATACGTAC CCCGACGGTC AGGCGGCCGC CATCTATGGC 
CAGTATCCGC CGCTGGTGAA TGCCATGCGA CCGCCCGGCC AGTGGCAGAC CTACGACATC 
GTGTTCCGGC GGCCCCGCTT CGATGCCGAA GGGCGGCTCC TGCAGCCGGC CCGCATGACG 
GTCTTCCACA ACGGCGTGCT CGTGCAGGAC TGCGCCGTGC TCACCGGTCC CACCGCACAT 
CGGGCCAGGC CACCCTACGA GCCGCATCCG GATCGGTTGC CGCTCATGCT GCAGGATCAC 
GGCGACCGCG TGCGGTTTCG CAACATCTGG GTGCGGCCGC TCGAATAG 

 

Protein sequence

MQRAMRRIIL LATLWIINGG ITKTMAQIDT TWAIHDMNRP RPPVVTPAPF DRPTAPPSDA 
IVLFDGTDLS AWERVGGGPA GWRVVDGYME VVPGSGNIQT RQGFGDVQLH LEWSVPEDVT 
GEGQGRGNSG VFLMGRYEVQ VLDSYQNDTY PDGQAAAIYG QYPPLVNAMR PPGQWQTYDI 
VFRRPRFDAE GRLLQPARMT VFHNGVLVQD CAVLTGPTAH RARPPYEPHP DRLPLMLQDH 
GDRVRFRNIW VRPLE