Gene Rmar_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1577 
Symbol 
ID8568229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1833570 
End bp1834232 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_003290852 
Protein GI268317133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT CCACCGTTTT CCGCTTCAGC CTTAACCACC TGCTGCTTCT GGGGCTCTGT 
TGCAGCTTCT GGACGGCGGC CGCGGCACAG GATGCCGCCC GCCAGCTCAT GGAGCGGCTG 
CGTGCGCGGT ACCAGCAGAT CGACGCACTG CAGGCGTCGT TCGTGCAGAT CCTGCAGACG 
CCCTATGCCG AGCGACCCGA CACGCTGCGC GGGCGGCTCT GGCTGCAGGG CGACCGCTAC 
CGCGTCGAGA CCCCGCGCCA GACGATCGTC ACCGACGGCC GCACCACCTG GGTCTACCTG 
CCCGACACAC GCCAGGTACT CATCAACGAC TACGTGCCCG ATGAGACCGG CTTTTCGCTC 
AATGAATTTC TGCTCCACTA CAGCGATCGC TACGAGGTGC TTGGCGGAGA GGCCATTACC 
TATCAGAACA CGGCGTATCA CCGATTGCGC CTGCGTCCGC TCCGGCCGGA AGCGCCGTTT 
CAGGAGGTGG TGCTCTGGGT GCGCGACCGG GACCTGCTCG TTACCCGCGT GGACGTGCGC 
GACGTGAACG ACACGCGCAT GACCTTTCTG CTGTCCGATC TGGTGCTGAA CCCTGCGCTC 
TCGCCCGAAC TGTTCACGTT TAGCCCGCCG GACGGGGTCG AAGTAGTGGA CCTGCGCCAG 
TGA
 
Protein sequence
MKFSTVFRFS LNHLLLLGLC CSFWTAAAAQ DAARQLMERL RARYQQIDAL QASFVQILQT 
PYAERPDTLR GRLWLQGDRY RVETPRQTIV TDGRTTWVYL PDTRQVLIND YVPDETGFSL 
NEFLLHYSDR YEVLGGEAIT YQNTAYHRLR LRPLRPEAPF QEVVLWVRDR DLLVTRVDVR 
DVNDTRMTFL LSDLVLNPAL SPELFTFSPP DGVEVVDLRQ