Gene Rmar_1568 details

Gene Information

• Locus tag: Rmar_1568
• ID: 8568220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1826347
• End bp: 1828446
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 65%
• Product: methionyl-tRNA synthetase
• Protein accession: YP_003290843
• Protein GI: 268317124

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAA CCCGATTCGA CCGCATTCTG GTAACGGCGG CCCTGCCTTA TGCGAACGGT 
CCCATTCACA TCGGCCATCT GGCCGGGGCC TACCTGCCGG CCGATCTGTA CTGCCGCTAC 
CAGCGCCTCA AGGGCCGCGA CGTGCTGTTC ATCTGCGGAT CGGACGAACT GGGCGTGGCC 
ATCCTGATGC GGGCGCTCGA AGAGGGCACC ACCCCGCAGG CCATCGTGGA TCGCTATCAC 
CCGATGATCC GCGACAGCTT CGCCCGCTTC GGGATGAGCT TCGATTACTA CGGGCGCACC 
ACCTCGCCCG TGCACTTCGA AACGAGCCAG GACTTCTTCC GACGGCTGGA CGAAAAAGGC 
GTCTTCAAAC TGAAAACCGA AAAGCAGCTC TACGACCCGG AGGCCGGTAT CTTTCTGGCC 
GACCGGTTCG TGCGGGGCAC CTGTCCGATC TGTGGCTACG AAGACGCCTA CGGCGATCAG 
TGCGAGCGCT GCGGCTCGTC GCTGAGCCCG ACCGACCTGA TCAACCCGCG CAGTGTGCTT 
TCGAACGCCA CGCCCGAGCT GCGAGAGACC ACGCACTGGT ACCTGCCGCT GGGCGACTTT 
CAGCCGAAGC TCGAGGCCTG GATCGCCACG CATCCGGAGT GGAAGCCGAA CGTGCTGGGA 
CAGGTGCGGA GCTGGCTCCA GCAGGGGCTG CGCGATCGGG CCGTCACGCG CGACATCCCC 
TGGGGCGTGC CGGTGCCCGA AGACGTGGCC CGTCGGCACG GCGTCCCGGC CGAAGGCAAG 
GTGCTCTACG TCTGGTTCGA CGCGCCCATC GGTTACATCT CGGCCACGCG CGAGTGGGCG 
CAGCAGAAAG GCGACCCCGA AGCCTGGCGG CGCTACTGGC AGGACGAGCG CACGCGGCTG 
ATTCATTTCA TCGGGAAAGA CAACATCGTC TTTCACTGTC TGATGTTTCC CGCCATGCTC 
ATGGCGCATG GCGAATTCGT GCTGCCCGAC AACGTGCCGG CCAACGAGTT TCTGAACCTG 
GAAGGCCGCA AGCTCTCGAC CAGCCGCGGC TGGGCCGTCT GGCTGCACGA ATACCTGGAG 
GAGTTTCCGC CGGACCTGCT CCGCTATGCG CTGGCAACCA TGCTGCCGGA GACGCGCGAC 
GCGGACTTCA GCTGGAAGGA GTTTCAGCAG CGCGTCAATG CGGAGCTGGC CGACATTCTG 
GGCAACTTCG TGCACCGCAC GCTGACCTTC GCGCAGCGGT TTGCCGAAAG GCGGGTGCCG 
CCGCTGCGCA ATCCGCGATC GGTGGACGAG GAGGTGCTCC GGGAGCTGGC CACCTTCCCG 
GAGCGCATCG GCTCGGCCTA CGAGCAGTTC CGCTTCCGGG AAGCCGTGCA GGAGACGATG 
AATCTGGCGC GGCTGGGCAA CAAGTACTTC AACGATACCG AACCCTGGCA CACGCGCAAG 
ACCGATCCGC AGGCCTGCGC CAACACGATC CACGTCTCGC TGCAGATCTG CGCAGCGCTC 
GGCATTCTGA TGGAGCCGGT GTTGCCGTTT GCCGCTGCGC GGCTGCGCGA AATGCTCCGG 
CTCGAAGGCG TGCGGTCCAG CACGCCGGGT GGGGAGGGTC AGCTGGGGTG GGACGATGCC 
GCCCGGCCGC TTCTGCCCGA AGGCCACGAA ATCGGTCGGC CGGAGATTCT GTTTACCAAG 
ATCGAAGATG AAGTGATCGA ACGTCAGATT GCCCGTCTGG AAGCGCGGGC GCAGCAGGCG 
GCCGCAAAGA CCGACGGGCC GCCGTACGCG CCGCTCAAGC CGGAGATCGT CTACGACGAC 
TTCGACCGCC TGGATCTTAG GGTAGGACGC GTCGAAAAAG CCGAGCGCGT GCCAAAATCT 
AAAAAGCTGC TGCGTCTGGA GGTGGACCTG GGCTTTGAAA AGCGCCAGAT TCTGGCCGGA 
GTGGCCGAGC AGATGGCACC CGAAGACCTG GAGGGGCGGC GCGTGGTGGT GGTGGCCAAC 
CTGAAGCCCC GCAAGATGAT GGGACTCGAG AGCCAGGGCA TGCTGCTCAT GGCCGAGGAT 
CGAGAGGGCC GCCTGGTGCC CGTCACGGCC GAGAGCGAGC CCGGCGCCGT GGTGCGGTGA 

 

Protein sequence

MDETRFDRIL VTAALPYANG PIHIGHLAGA YLPADLYCRY QRLKGRDVLF ICGSDELGVA 
ILMRALEEGT TPQAIVDRYH PMIRDSFARF GMSFDYYGRT TSPVHFETSQ DFFRRLDEKG 
VFKLKTEKQL YDPEAGIFLA DRFVRGTCPI CGYEDAYGDQ CERCGSSLSP TDLINPRSVL 
SNATPELRET THWYLPLGDF QPKLEAWIAT HPEWKPNVLG QVRSWLQQGL RDRAVTRDIP 
WGVPVPEDVA RRHGVPAEGK VLYVWFDAPI GYISATREWA QQKGDPEAWR RYWQDERTRL 
IHFIGKDNIV FHCLMFPAML MAHGEFVLPD NVPANEFLNL EGRKLSTSRG WAVWLHEYLE 
EFPPDLLRYA LATMLPETRD ADFSWKEFQQ RVNAELADIL GNFVHRTLTF AQRFAERRVP 
PLRNPRSVDE EVLRELATFP ERIGSAYEQF RFREAVQETM NLARLGNKYF NDTEPWHTRK 
TDPQACANTI HVSLQICAAL GILMEPVLPF AAARLREMLR LEGVRSSTPG GEGQLGWDDA 
ARPLLPEGHE IGRPEILFTK IEDEVIERQI ARLEARAQQA AAKTDGPPYA PLKPEIVYDD 
FDRLDLRVGR VEKAERVPKS KKLLRLEVDL GFEKRQILAG VAEQMAPEDL EGRRVVVVAN 
LKPRKMMGLE SQGMLLMAED REGRLVPVTA ESEPGAVVR