Gene Rmar_1549 details

Gene Information

• Locus tag: Rmar_1549
• ID: 8568201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1806483
• End bp: 1808612
• Gene Length: 2130 bp
• Protein Length: 709 aa
• Translation table: 11
• GC content: 69%
• Product: Transketolase domain protein
• Protein accession: YP_003290824
• Protein GI: 268317105

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGAGA AAAAACGCGC TGCTACCACC CGGCGCAAGA CGCGCAGGAG CTTGCCGGCC 
ACCACGCCGG ATGCGGCTTT CGACTGGCTG CGCGTGGCCC GTCTGGTGCT GACCTCTCGC 
TATCTCGACG ATCTGGAAGA GACGCGCCTG CTGCCTGAGC GCAGGGTGCG CTATCAGTTT 
TCGGCGAAGG GGCACGAGCT GGCGCAGGTC CTGCTCGGGC AGCTCCTGAC GCACCCGAAG 
GACGGCGTCA GCACCTACTA CCGCTCGCGG CCGCTGATGC TGGCGCTGGG CGTCTCGCCC 
GAAGAAGCGC TGGCCGCCTC GCTGGGCAAG GCAGGCGCCT ACAGCGACGG CCGCGACGTG 
GGAGTGGTCT GCAACCTGCC CGGCCGCAAC GGTCCCACCG TGCTGCCCAT GGCGGGCGAC 
GTGGGTTCGC AGTACACGCC GGGCGTCGGC TGGGCGCAGG CCATCTGCTA CCGACGCGAC 
GTGCTTCGAG AAGAAGCCTA CCGGGGCGCG CTGGCCGTGG TGCACGGGGG TGAGGGTTCG 
GTGGCGACCA ACGGCTTCTG GGCCGCGCTG AACATCGCCA CGACGCTCCG ACTGCCCGTG 
CTTTTCTACA TCGAAGACAA CGGCTACGCC ATTTCGGTCC CGCGCGAACT GCAGACGCCG 
GGCGGCAACA TCTCGAAGAA TCTGGCTTCG TTTCAGAACC TGCAGGTGCT TGACGGCGAC 
GGCGCGCGGC CGGAGGAGGC CGCCCGGCTG TTGCACGAAG CGGTGCAACG CGTTCGATCC 
GGCGAGGGAC CGGTGCTGTT GCGCCTGACG ATGCCCCGGC TTTCGGGCCA CTCCGGCCAC 
GACAATCAGG CCTACAAGCC GCCGGAGGTG CTGGAGGCCG AGCGGGCGCG CGATCCGCTC 
CCGGCGCTTC GGGCATTTCT GGTGCCTGCG GTGCTGTCGC CCGAAGCCTG GGCCGAGCTG 
GAGGCGGAGG TGGCTCGCGA GGTGGAGGCG GCCCTGGAGG CGGCGCTTGC CCGTCCGGAT 
CCGGACCCGT CCCGGGTGAC CCGCTACGTC TTTGCCGAGG TGGGACCCGA CGGCACACCG 
GAGCTCCAGC AGGCCGGCGG CATGGCACCG GAAGGCGTGA CGCTACCGAA GGGCACCGAC 
CGACCCCGAC CGGAGCCGCC ACGCATCAAC ATGGTGGAGG CGATTCGTCG AACGCTGGCC 
CACGAGCTGC GCATCAACCC GCGCGTGGTG GTCTTCGGCG AAGACGTGGG CAAAAAAGGC 
GGGGTGCACA CGGCCACGCT CGGGTTGCAG GAGGCGTTCG GCGAAGCGCG CGTGTTCGAC 
ACCAGCCTGT CCGAAGAAGG GATTGTCGGA CGGGCCGTCG GCATGGCGCT GGCCGGGTTG 
ATGCCGGTGG CCGAGATTCA ATTTCGGAAA TACGCCGATC CGGCCACCGA GCAGCTCAAC 
AACTGCGGTA CGATCCGCTG GCGCACGGCC AACCGCTTTG CCGCGCCGAT CGTGGTGCGC 
ATGCCCGGCG GGTTTGCCCG CGTGGGCGAT CCCTGGCACA GCGTTTCCGA CGAGGTGCGC 
TGGGTGCACG CGATCGGCTG GCAGGTGGCC TATCCGTCGA ATGCCGAGGA CGCCGTCGGG 
CTGCTCCGGG CGGCCATGCG GGCGCTCGAT CCCACCATCT TCTTCGAACA CCGGCTGCTG 
CTGGACCATC CGGCCGCCCG GCGTCCCTAT CCCGGCGACG ACTACGTGTT GCCGTTCGGG 
CGTGCCCGCA TCGTTCGCTC CGGCGAGGCG CTCACCGTGG TCACCTGGGG CGCCATGGTC 
CATCGCTGCG AAGAGGCGGC CGAAGCTGCG GGCGTGGACG CCGAGATCAT CGACCTGCGC 
ACGCTGCGAC CCTGGGATCG AACGGCCGTG CTGCATTCGG TGCAGAAAAC CAATCGGTGT 
CTGATCGTGC ACGAAGACAC GCTCACGGCA GGCTTCGGCG CGGAGATTGC CGCCGTACTG 
GCCCGCGACG CCTTCACCTA CCTGGATGCG CCCGTCGAGC GGCTGGCCGT CCCGGACATC 
CCGATTCCCT ACAACCCGCA GTTGCTGGAG GCCACCGTGC CGGAGGTGGC GCAGATTGCC 
GAGGCCATGC AGGCGCTGGT TGCTTTTTGA 

 

Protein sequence

MGEKKRAATT RRKTRRSLPA TTPDAAFDWL RVARLVLTSR YLDDLEETRL LPERRVRYQF 
SAKGHELAQV LLGQLLTHPK DGVSTYYRSR PLMLALGVSP EEALAASLGK AGAYSDGRDV 
GVVCNLPGRN GPTVLPMAGD VGSQYTPGVG WAQAICYRRD VLREEAYRGA LAVVHGGEGS 
VATNGFWAAL NIATTLRLPV LFYIEDNGYA ISVPRELQTP GGNISKNLAS FQNLQVLDGD 
GARPEEAARL LHEAVQRVRS GEGPVLLRLT MPRLSGHSGH DNQAYKPPEV LEAERARDPL 
PALRAFLVPA VLSPEAWAEL EAEVAREVEA ALEAALARPD PDPSRVTRYV FAEVGPDGTP 
ELQQAGGMAP EGVTLPKGTD RPRPEPPRIN MVEAIRRTLA HELRINPRVV VFGEDVGKKG 
GVHTATLGLQ EAFGEARVFD TSLSEEGIVG RAVGMALAGL MPVAEIQFRK YADPATEQLN 
NCGTIRWRTA NRFAAPIVVR MPGGFARVGD PWHSVSDEVR WVHAIGWQVA YPSNAEDAVG 
LLRAAMRALD PTIFFEHRLL LDHPAARRPY PGDDYVLPFG RARIVRSGEA LTVVTWGAMV 
HRCEEAAEAA GVDAEIIDLR TLRPWDRTAV LHSVQKTNRC LIVHEDTLTA GFGAEIAAVL 
ARDAFTYLDA PVERLAVPDI PIPYNPQLLE ATVPEVAQIA EAMQALVAF