Gene Rmar_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1527 
Symbol 
ID8568178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1780001 
End bp1780834 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003290802 
Protein GI268317083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGC ATGCAGACCT CGTGCAGCAG TTCGATCTGA GCGGCCGGGT GGCGCTCGTC 
ACCGGCGGTA GCGGCGCGCT CGGACGCGCC ATGGCGCGCG GCCTGGCCAT GGCCGGTGCC
CGGGTGGCCC TGCTGGCCCG CCGACCGGAG CGCCTGCAGG AAGCCGTGGC CGAGATCGAG
CAACTCGGCG GCGAAGCGCT GGCCCTTCCG GGCGACGTGC TGGATCGCGC TTCGCTCGAA
AAGGCCCGGG AAACCCTGCT GAGCCACTGG GATCGGCTCG ACATCCTGGT CAACGGCGCC
GGCGGCAACG TCCGGGAGGC CACGCTCGAA CCCGGCCACA CCGTCTTCGA GCTGACCGAA
GAAGCCTTCC GCAGGGTCAT CGACCTGAAC CTGATGGGCA CCATCCTTCC CACCCTGATC
TTCGGGGAAG TGATGGCCCG GCAGCGGCGC GGCGTGATCG TCAACGTCTC GTCCATGGCC
GCCACCCGCA TCCTCACCCG CGTGGTGGGC TACAGCGCGG CCAAGGCCGC CGTGGAGAAT
TTCACGCGCT GGATGGCCGT GGAACTGGCC CGCACCTACG GCGAAGGGCT TCGCGTCAAT
GCGATCGCGC CGGGCTTCTT CCTGGGCGAG CAGAACCGGC ATCTGCTGCT CCGCGAAGAC
GGATCGCTGA CCGAACGCGG CCAGGCGATC CTCGCGCATA CCCCTATGGG ACGCTTCGGC
GAGGCCGATG ATCTGATCGG CACGCTCGTC TGGCTGTGCA GCGACGCTTC GCGCTTTGTG
ACGGGCGTCG TGGTTCCTGT TGACGGAGGA TTTTCCATCT ACACCGGCAT CTGA
 
Protein sequence
MGMHADLVQQ FDLSGRVALV TGGSGALGRA MARGLAMAGA RVALLARRPE RLQEAVAEIE 
QLGGEALALP GDVLDRASLE KARETLLSHW DRLDILVNGA GGNVREATLE PGHTVFELTE
EAFRRVIDLN LMGTILPTLI FGEVMARQRR GVIVNVSSMA ATRILTRVVG YSAAKAAVEN
FTRWMAVELA RTYGEGLRVN AIAPGFFLGE QNRHLLLRED GSLTERGQAI LAHTPMGRFG
EADDLIGTLV WLCSDASRFV TGVVVPVDGG FSIYTGI