| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1481 |
|---|
| Symbol | |
|---|
| ID | 8568132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1728794 |
|---|
| End bp | 1730293 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | RagB/SusD domain protein |
|---|
| Protein accession | YP_003290756 |
|---|
| Protein GI | 268317037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.476602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT TTCGTCTATC GACCGCCTGG CTCGTGGCAT GGATCGGACT GACCGGCACG
CTGCTGGTCG GCTGCTCCGA TATGCTCGAG CCGGAAGTGT ACAGCGAACT GACACCGGAG
ACCTTCTTCT CGTCGGAAGC CGACTTCAAC AGCGCGGTCG TCGCCATCTA CAATGCTTTT
TCGACCGACT GGGGTACGAC AGACCTGGGC GACGGCCAGT GGTATGCGGC GCTCTACAAC
CACGACCGCA AAACCTACTG GGCCCGCAGC GAAATCACTA CCGACGAATA CGCCACCGGC
TGGGACCCGA CCTTCACCAC GTTCTCCTGG GGACCGGCCA CGTTCTCCGG CGTGGAAGCC
TCCAATTACA TGAAGATTCG CTACGTGGCC CGCGCTACGG ACGTCATCGA CAAGATCGAA
AAATCCACGG CGTCCGTGCC GGAACACATC AAGGCCCGCT ACATCGCCGA GGCCAAGGTG
CTCCGGGCCT GGATGATGTA CATCCTGTAC GACTTTTTCG GGCCGGTCAA CGTCAAACTG
GATCCCGCCA CGCTCTACAG CACGGAAATC ACGCCGCGTC CTTCCCGCGA AGAATACGTG
GCGGCCATCG AGCGGGATCT CCAGGAGGCC ATCCCGAACC TGCCGGACAA ATACAACGAC
GATCCCGCCA ACTGGGGACG AGTAAGCAAG GGCGTGGCCC GCATGCTGTT GCTTCGGCTT
TACATGCACG AGAAACGCTG GGCCGAGGCG GAAAACGTGG CCCGCGAGCT CATGAACATG
GGCTATACGC TGATGCCCGA GTACACGCAG ATCTGTGAGG AGCGGAATCC CGAGCTGATC
TACGCGGTGC CAGCCGACGC CTCGTCGCCG AACTGGTACT GGATGGAAAT TCTACCCAAT
GACTTCGCCT CGGCACAGGT CGGCGATCAG ACGATCACCG GGCCGCAGGG TTGGGCCGGT
TTCTGGATGC CCTGGGACTT TTACGATCAG TATGAAGCCG GCGATAAGCG ACTGTATACG
ATCCTCGACA GTTACACGAA CGTGCGCGGG CAGCTCATCA CGCGCCAGCG GATGCGCGGA
GCGATTCCGC TCAAGTGCAT CGGCGATCTG GGCACCTCGG CCGGAGCCGA GATCGACTGG
CCGGTCTTCC GCTATGCCGA GGTGTTGCTG TCGCTGGCCG AGGCGATCAA CGAGCAGCGC
GGCCCCACAG CCGAGGCCCT TCAGTACGTG AACATGGTCC GGGAGCGGGC CGGCGTGGCG
CCCTGGACGC CCGATCAGTT TACCTCGAAA GAACAATTGC GCGACTCGCT GCTGGTCGAG
CGCGGCCGTG AACTCTACAG CGAGGGAGTC CGTCGCCAGG ACCTGATCCG CCACGGCAAG
TTCATCGAGT ACGCGCAGCG TCGCGGCATC AACGCGCAGC CGCACCACGT GCTCTTCCCG
ATCCCGCAGT TTGTGATCGA CCAGAGCGGC GGCGTCATCG AACAGAACCC GGGTTACTGA
|
|---|
| Protein sequence | MKRFRLSTAW LVAWIGLTGT LLVGCSDMLE PEVYSELTPE TFFSSEADFN SAVVAIYNAF
STDWGTTDLG DGQWYAALYN HDRKTYWARS EITTDEYATG WDPTFTTFSW GPATFSGVEA
SNYMKIRYVA RATDVIDKIE KSTASVPEHI KARYIAEAKV LRAWMMYILY DFFGPVNVKL
DPATLYSTEI TPRPSREEYV AAIERDLQEA IPNLPDKYND DPANWGRVSK GVARMLLLRL
YMHEKRWAEA ENVARELMNM GYTLMPEYTQ ICEERNPELI YAVPADASSP NWYWMEILPN
DFASAQVGDQ TITGPQGWAG FWMPWDFYDQ YEAGDKRLYT ILDSYTNVRG QLITRQRMRG
AIPLKCIGDL GTSAGAEIDW PVFRYAEVLL SLAEAINEQR GPTAEALQYV NMVRERAGVA
PWTPDQFTSK EQLRDSLLVE RGRELYSEGV RRQDLIRHGK FIEYAQRRGI NAQPHHVLFP
IPQFVIDQSG GVIEQNPGY
|
|---|
| |