Gene Rmar_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1473 
Symbol 
ID8568124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1717155 
End bp1717778 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003290748 
Protein GI268317029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.245471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGTC ACGACCTGCA GGAAGCCATC CTGGAAGCCG CCCAGTACCT GCTGATCCGC 
GAAGGGTACG GCAGCCTGAC GATGCGGCGT ATTGCACAGC GGGCCGGTTG CAGTGTAGGA 
AGCCTTTATC TCTACTTCGA CAGCAAAGAA GGGCTGCTCT TTGCCCTGAT GGATCGGGCG 
CAGGAGCGGC TGGCCGAGCG CTTTTTCGAT CCGCAGATTC AGGCGATCGA CGATCCCCGC 
GGGCGGTTGC AGGCGCTGGC GCGGGCCTAC GTGGACTTCG GGCTGACCTA TCCCGAATCC 
TACGAGATTC TGTTCATGCT GCATCCGCGC GAGCTGGCCT CGTACCCCGA GGAGCGGTTG 
CAGCGGGCCT ACCGGCTGCT GGATCCCATT GTGGAGGCGA TCGAGGATTA CGTACGTCGG 
CACGACCTGG AAATGCCCGA CATCCGCGTG GCGGCCGTGT CGTTCTGGAG CGCCCTCCAT 
GGGATCGTCA GCCTGCTGCT GGCCGGACGC CTGGCCCGGC TCCGGCTCGA GGTGGATCAT 
GAAGCGCTGA TCGAACACGC CATCCGTCAG GCCATCGGCG GACTCTGCCG GCTGATGCGG 
CGCAAGGACA ATCGGGAAGC ATGA
 
Protein sequence
MSRHDLQEAI LEAAQYLLIR EGYGSLTMRR IAQRAGCSVG SLYLYFDSKE GLLFALMDRA 
QERLAERFFD PQIQAIDDPR GRLQALARAY VDFGLTYPES YEILFMLHPR ELASYPEERL 
QRAYRLLDPI VEAIEDYVRR HDLEMPDIRV AAVSFWSALH GIVSLLLAGR LARLRLEVDH 
EALIEHAIRQ AIGGLCRLMR RKDNREA