| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1444 |
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| Symbol | |
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| ID | 8568095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 1684533 |
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| End bp | 1686278 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003290719 |
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| Protein GI | 268317000 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0135797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAGA AAAGTGGCGC CTGGTTGATC CGATACGCCC TGGAGCAGTT GCCCGTGCCG
TTCACGTTCG GCATTCCGGG CGTGCACGTA ACGGAGCTGT ACGACGAGCT GGGCCGGAGC
GAGCGTGTGC GGCCCGTGCT GGTCACGCAC GAAGGCGGCG GGGCCTTTAT GGCCGACGCC
GTCAGTCGGG TGGCACCCGA GCGCATCGGA GCGCTTGCGA TCGTGCCCGC AGCCGGCGCG
GCGCTGGCCA TGGGCGGCAT GGGTGAGGCC TATCTCGCGG GTGTGCCGAT GCTGGTGATC
TCGGGCGGCA TTCGGACGGA CATCCCGTTT CGTTTTCAAC TGCATGAGAT CGATCAGGAA
AAGCTGGTGG GGGCCGTCAC GAAAGGGTTC TGGCGGGTGC TGCGGCATGA GGAGATCGTT
CCGACCCTCT TCGAGGCGTA CCGAACGGCC GTCTCGGGCG TGCCCGGACC CGTCTTTGTC
GAAGTGCCCG TCAACGTGCA GCTCTTCCGG GAGGAAGTAC CGGAGCCGCC CGCGTTCACG
CCGCCTCCGC CGCCGGAGGC GCCGGACGAC GCGCTGATCG AACAGGCCGC CCGGGTACTG
GCCGAAGCGG AACGGCCGGG GATTTTTGTC GGCTGGGGGG CCGTCGATGC GACCGAGTCG
CTCATCGAGA TCGCCGAGCG GCTGGGCGCG CCGGTGGCGA CCACGCTGCA GGGATTGAGC
GCTTTTCCGG GCAACCATCC GCTGCATGCC GGCATGGGCT TTTCGCAGGC GGCCGTGCCG
GCGGCCGAAC GGGCCTTTGC GGACTGCGAC GCGCTGCTGG CCGTGGGGAC GCGCTTTGCA
GAGATTCCCA CCGGGAGCTT TGGCGTGCGC GTGCCCGAGG CGCTTGTGCA TATCGACCTG
GACCCCGGTG TGCTTGGCGT CAACTACCCG GCCCGCGTGG CCATTGCGGG CGACAGCCGC
GTGGTGCTGC CGCGTCTCCT GGAGGCACTC CGGGCCATGG GCGTGGACCG GCGGGACCGG
CGTGAGGCCG TCGCCCGCCA GATCCGGGCC GACAAGCAGG CCTATCGGGA CGAATGGTAC
CGGCACGACA GCGGCGCGCG CGTCAATCCC GTCCGGTTCT TCGATGCGCT GCGGGCCGTG
TTGCCCGACG AGGCCATCGT TACGGTGGAC GACGGCAACC ATACCTACCT GACGGCCGAG
CTGTTCGAGG TGCGGCGGCC GCGCACGCTC ATCGTGCCGA CCGACTTCAA CTGCATGGGG
TATGCCGTCC CGGCGGCCGT GGGCGCGAAA CTGGCGCACC CCGACCGTCC GGTGGTGGCC
GTCGTGGGAG ACGGAGCGTT TCTGATGACC GGGCTGGAGC TGCTCACGGC CCGGCGCTCG
GGCGTCGGGG TGGTCTGCTG CGTCTTCCAC GACGGCGAGC TGAGCCAGAT CTCCCAGGGC
CAGGAGATCC CCTACAACCG AAAGACCTGC ACGGTGATCG GCGAGGTGCG ACTCGACGGA
ATTGCCCATG CCGTGGGCGC CCGGTATGTC CGATTGCAGG GCGAGCCGGC CGTGCTGGAG
CGGACGCTGC GTGAGGCGCT GGCGTGGGCA CAGGGCGGCG ACGTCGTGGT GGTGGACGTG
CCCATCGACT ACAGCCGCCG CACCCGCTTC ACCCGGGGCG TGGTAAAGAC CGTGCTCGAG
CGCTTCCCGA CGGGCGACCG GCTGCGTTTC GTAGGCCGCG CCCTCTGGCG CCGGCTGCGG
GGATAA
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| Protein sequence | MPKKSGAWLI RYALEQLPVP FTFGIPGVHV TELYDELGRS ERVRPVLVTH EGGGAFMADA
VSRVAPERIG ALAIVPAAGA ALAMGGMGEA YLAGVPMLVI SGGIRTDIPF RFQLHEIDQE
KLVGAVTKGF WRVLRHEEIV PTLFEAYRTA VSGVPGPVFV EVPVNVQLFR EEVPEPPAFT
PPPPPEAPDD ALIEQAARVL AEAERPGIFV GWGAVDATES LIEIAERLGA PVATTLQGLS
AFPGNHPLHA GMGFSQAAVP AAERAFADCD ALLAVGTRFA EIPTGSFGVR VPEALVHIDL
DPGVLGVNYP ARVAIAGDSR VVLPRLLEAL RAMGVDRRDR REAVARQIRA DKQAYRDEWY
RHDSGARVNP VRFFDALRAV LPDEAIVTVD DGNHTYLTAE LFEVRRPRTL IVPTDFNCMG
YAVPAAVGAK LAHPDRPVVA VVGDGAFLMT GLELLTARRS GVGVVCCVFH DGELSQISQG
QEIPYNRKTC TVIGEVRLDG IAHAVGARYV RLQGEPAVLE RTLREALAWA QGGDVVVVDV
PIDYSRRTRF TRGVVKTVLE RFPTGDRLRF VGRALWRRLR G
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