Gene Rmar_1439 details

Gene Information

• Locus tag: Rmar_1439
• ID: 8568090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1677029
• End bp: 1679020
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 64%
• Product: hypothetical protein
• Protein accession: YP_003290714
• Protein GI: 268316995

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCCCG ATCATCCTCG TGTCCGAGAG TGGCGGCACC GCCTGCTGTG GTTTGTGGGC 
GGCCTGCTGC TGTTTGAAAC GCTGAGCGGG CTGGGCATTT ACCTGCTACC GTTCAGCGTG 
CCCAGTCAGT TCATCGTGCT GCTTCACACC GCAGGGGGAT TGGTGTTTCT GCTCCCTTAC 
CTGTGGTACC AGGTGCGGCA CTGGTGGATT TACCGGCGCA TGCCGTGGAA TCACATCGTG 
GTGCTCGGCT ATGTGGGGAT GGTCGCCACG CTGGTGGCCA TCGTGTCGGG ACTGGTGCTG 
ACGGTACAGG CGCTCTGGGG CACGCGTATC CACTACGGCT GGAGCCGGGT GCACCTCTGG 
TCCACGTTCG CGCTGATCGC CACGGTGGTG CCGCACGTGG TCTGGATCAT GGTGCGCGAC 
CATCGCGCCC GCAAGCGCGA GGCGATCCGT CCGGTGCTGG TGGCGCAGCG ACATTTTTCG 
ACGGCGGTGA CGGCGTTGAC GCTGGGGCTG TTCGTCGTGG TGGTAGGGCT GGCCTATGTC 
TACCGGGCGC CGGCCCGCTA TGTCGATTTT CCGCCGGACT ACAGCTACCT CTATGGCCCC 
GACCGTCCTT TCGCGCCGAG TCTGGCCCGC ACCGAGAACA ACAAGGCCAT TCCGGCCGAG 
ATGCTGGGTG GGTCGGCTTC GTGCGGGCGC TCGGGCTGCC ACGAGCAGAT CTACGAAGAA 
TGGCTGCCCA GCGCGCACCG CTATTCGGCG GCCGATCCGC TGTTTCGTCG GGTACAGCAT 
GTGATGGGCA CGCAGAACGG GGCCGAATCG ACCCGCTACT GTGGCGGTTG CCACGACCCG 
ATCTCGCTCT TCAGCGCTGC GAAGAACCTG TTTCGCGACG ACCTGACCAA TCCTGTGGGG 
CTGCATGAGG GCGTCTCGTG CGTGACCTGC CATGCGATCC AGGAAGTGGA CGTGCGGGGC 
AATGCGGACT ACGTGATCCA TGCGCCGGAA CCCTATCTGT TCGAGCGCGA CACGAGCGGT 
CTCGGTGTAC TGATCAGCAA CTTCCTGATT CGCTCCTATC CGAAGCACCA CGTTTCGAGC 
CTGAGCCGCC GCATGTTCAA GAGCCCGGAG TTCTGTGGCG CCTGCCACAA GCAGTTCGTG 
GATGAGGAGA TCAACAACGT GGGCTGGGTG CAGCTCCAGA ACCAGTACGA CAACTGGCGC 
AAGAGCCGCT GGAATCATCC GGGCGATCCC GCGAAGACGA TCGAATGCCG GGAGTGCCAC 
ATGCCGCTGG TCGATTCGTT CGATCCGGCT CGTGGCGATG CGCTCGACTA CAACCGCTCG 
CCCGACGACG GCAAACACCG CAGCCATCGC TTCCTGGGAG CCAATCAGTT CATCCCGGCC 
CACCTGGAGC TGCCGGGCGG CAAAGAACAT GCACGGCTCG TCGAAAAATG GCTCCGGGGC 
GAGATCGAAG TGCCGGAGAT TGCCGACAAG TGGCGCAACG GGTCGGTCAT TCCCATCCAG 
GTGCTGGCCC CGGAACGTGC CCGTCCCGGT GAAACGGTCA CCGTCGAGGT GGCCATGCTG 
AACAACAAGG CCGGGCACGA CTTCCCCACC GGGCCGCTGG ACATCATTCA GGCCTGGGTC 
GAGTTTGTGG TGACCGACGA GCAGGGTCGG GAGGTGTTCG CCAGCGGACG GCTCGACGAC 
CGCTACTTCA TCGAGCCCGG TTCCTTCGTC TTCAAGGCGG AGCCGGTGGA CCGCTACGGC 
AACCTGATCG ACCGGCACAA CCTCTGGGAG ATGGTGGGCG TGCGCTACAA GCGCGCCATG 
TTTCCGGGCT ATGCCGATCA GGCCCGCTAC ACGTTCACCG TGCCGCGCGA CGCCCGTCGC 
CTGCACGTGA AGGCCCGACT CTGCTACCGC AAGGTGAACC AGTTCCTGCT CAACTTCCTG 
TTCCCCGACA CCACGCTGAC CGCACCGGTG ACGGAGCTGT CGGCCGATTC CACGGTGATT 
CAGGTGATGT AA 

 

Protein sequence

MQPDHPRVRE WRHRLLWFVG GLLLFETLSG LGIYLLPFSV PSQFIVLLHT AGGLVFLLPY 
LWYQVRHWWI YRRMPWNHIV VLGYVGMVAT LVAIVSGLVL TVQALWGTRI HYGWSRVHLW 
STFALIATVV PHVVWIMVRD HRARKREAIR PVLVAQRHFS TAVTALTLGL FVVVVGLAYV 
YRAPARYVDF PPDYSYLYGP DRPFAPSLAR TENNKAIPAE MLGGSASCGR SGCHEQIYEE 
WLPSAHRYSA ADPLFRRVQH VMGTQNGAES TRYCGGCHDP ISLFSAAKNL FRDDLTNPVG 
LHEGVSCVTC HAIQEVDVRG NADYVIHAPE PYLFERDTSG LGVLISNFLI RSYPKHHVSS 
LSRRMFKSPE FCGACHKQFV DEEINNVGWV QLQNQYDNWR KSRWNHPGDP AKTIECRECH 
MPLVDSFDPA RGDALDYNRS PDDGKHRSHR FLGANQFIPA HLELPGGKEH ARLVEKWLRG 
EIEVPEIADK WRNGSVIPIQ VLAPERARPG ETVTVEVAML NNKAGHDFPT GPLDIIQAWV 
EFVVTDEQGR EVFASGRLDD RYFIEPGSFV FKAEPVDRYG NLIDRHNLWE MVGVRYKRAM 
FPGYADQARY TFTVPRDARR LHVKARLCYR KVNQFLLNFL FPDTTLTAPV TELSADSTVI 
QVM