Gene Rmar_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1421 
Symbol 
ID8568072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1655932 
End bp1657221 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID 
Productamidohydrolase 
Protein accessionYP_003290696 
Protein GI268316977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTC GTCTCACATT GCTGATCGCG CTCATTCCGC TGGCGCTGTA CGGGCAGGAG 
CAGCCCCTGG TCTTTCGGGG CGCGCGGCTT TATCCGATCA GCCAGCCGCC CATTGAACGG
GGCGTGCTGG TGGTGCAGCA TGGCAAGATC GTGGCGGTGG GGTCGGAAGG CGAGGTATCG
ATTCCCGAGC AGGCCATCGT CTACGACGTG ACGGGCAAGG TGATCATGCC GGGGCTGGTC
GATACGCACT CGCACATCGG ACGCGTGGAG GGAGGCGACC GCTCGGCGCC CATGCATCCG
GCCGTCCGCA CGCTGGATGC CATCGACGTG CGGCATAGCT CGGTGCAGCG GGCGCGGGCC
GGAGGCATCA CCACCGTCAA CGTGATGTCG GGCTCCGGGC ATCTGCTCAG CGGCCAGACC
GTCTACCTAA AGCTCCGAAA AGGCAATACC ATTGAGGACC TGCTCTACTG CAGGGATCCG
TTGGCGGAGG TCTGCGGCGG CCTGAAGATG GCCAACGGCA CGAATCCGCA GGGCGATCCG
CCGTTTCCGG GCACACGGGC CAAAGCAGCC GCGCTGGTCC GCCAGCAATT TCTGAAGGCA
CTGGCCTACC GGCGCAAGAT CGAGCAGGCG AAGGGCGATC CCGAAAAGAT GCCGGAGCGT
GACCTGGACA TGGAAGCGCT GCTGGAGGTG CTCGACGGCC GCCGCATTGT GCATTTCCAC
ACGCATCGGC ACGACGACAT CCTGACCGTT TTGCGGTTCA AGCGGGAGTT CGGCTTCCGG
GTCGTGCTGC ACCATGTGAG CGAGGCCTGG AAGGTGGCCG ACGAGATCGC CGCGGCCGGC
GTGCCCTGCT CGATCATCAT CCTGGATGCG CCAGGCGGCA AGCTGGAGGC CGCCGAAATT
CGCATGGAAA ACGGGGCCGT GCTGGAGAAA GCGGGCGTCG ATGTGGCCAT TCACACGGAC
GACCTGATCA CGGATTCGCG CTGGTTTCTG CGTTCGGCTG CGCTGGCCGT GCGGGCCGGC
ATGTCGCCCG AAAAAGCGCT GGAGGCGCTC ACGCTGGCGG GCGCCCGCAT GCTGGACCTG
GCCGACCGGA TCGGGTCGCT GGATCCCGGC AAGGACGCCG ATTTCATCAT CCTGTCGGGC
GATCCTTTCA GCATCTACAC GCACGTGGAG CAGACCTGGG TGGAAGGACA AAAGGTGTTC
GACCGGGCCG ATCCGGAAGA CCGCAGGTAT GCGGTCGGCG GAACCGGTGT GTTCGATGAT
GGCGATACGT TCGTCCATGA AGCGCACTGA
 
Protein sequence
MRVRLTLLIA LIPLALYGQE QPLVFRGARL YPISQPPIER GVLVVQHGKI VAVGSEGEVS 
IPEQAIVYDV TGKVIMPGLV DTHSHIGRVE GGDRSAPMHP AVRTLDAIDV RHSSVQRARA
GGITTVNVMS GSGHLLSGQT VYLKLRKGNT IEDLLYCRDP LAEVCGGLKM ANGTNPQGDP
PFPGTRAKAA ALVRQQFLKA LAYRRKIEQA KGDPEKMPER DLDMEALLEV LDGRRIVHFH
THRHDDILTV LRFKREFGFR VVLHHVSEAW KVADEIAAAG VPCSIIILDA PGGKLEAAEI
RMENGAVLEK AGVDVAIHTD DLITDSRWFL RSAALAVRAG MSPEKALEAL TLAGARMLDL
ADRIGSLDPG KDADFIILSG DPFSIYTHVE QTWVEGQKVF DRADPEDRRY AVGGTGVFDD
GDTFVHEAH