| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1400 |
|---|
| Symbol | |
|---|
| ID | 8568051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1633989 |
|---|
| End bp | 1635365 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | phosphodiesterase/alkaline phosphatase D |
|---|
| Protein accession | YP_003290677 |
|---|
| Protein GI | 268316958 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCT GTCTGCTTTT CCTCTGCGGG CTCTGTGGGC TCATCGGAGT CGCTGTAGCC
CAGGTGCCCG TCCGGCTACC CGAGACGCTC CCCGTGGCCG AACTGCTGCG CTCAGGTCCG
ATGAACGGCT ACGCCACCCA GCGCGAAGTG GTCGTCTGGC TGCAGACGTG GGCGCCGGCT
CAGGTGCAAC TGCTCTACCG CGAAGAGGGG CAGCCCGAAG ACAGCGCGCG CATCACCCCG
CCGTACTTTG CCGGCCCCGA AACGGACTAC ACCGTGCACA TCTCCGTGCC CTACCTGGAG
CCGGGCCGCC GCTACGTTTA CGACGTGGTA CTCAACGACA CGATCCTGGC GCTTCCCTAC
CAGCCCCGCT TCCAGACGCA ACCGCTCTGG CAATGGCGCA CCGATCCGCC CACGTTCACC
GTGGCCACAG CTTCCTGCTT CTACGTGAAC GATCCGCCCT ACGACCGCCC CGGCCAGCCC
TACGGCGGCG ACTTCCAGAT CCTCACGCAC CTGACACGCC TCCGTCCCGA CGTGATGATC
TGGCTGGGCG ACAACACCTA CCTGCGCGAG GCGGACTTCG GCAGCCCGAC CATGATGTCC
TACCGCTACG CGCACACCCG CAGTCACCCA CTGCTCCAGG AACTGCTCGC TACGGCCCAC
CACTACGCCG TCTGGGACGA CCACGACTAC GGTCCCAACG ACGCCGACCG GAGCTATGTG
CTCAAAGGCG CCGCACTGCG CATCTTCCAG CAGTACTGGG CCAATCCGTC CTACGGGCTG
CCCGGCACAC CCGGCGTCTT CACCCAGTTC ACCTGGGGCG ACGTGGATTT CTTTCTGCTG
GACGACCGCT TCTACCGGAG CCCCAACGAC GCCCCGAACG ATTCCACCAA GACCATGTGG
GGCGAGGCGC AGCTCACCTG GCTTATCGAC GCGCTCACCT ACAGCCGCGC CCCCTTCAAG
ATCGTCGCCA ACGGCAACCA GATCCTCAAC CGCTCCACCC GCTTCGAGTC GGTGGCCGCC
CGCTTTCCGC GCGATTACGA GCGGCTGCTC CGGGAAATCG TACGCCGCGG CATCTCCGGC
GTGGTGTTTC TGAGCGGCGA CCGTCACCAC ACCGAGCTGC TGCGCTACGA GCCGGAAAGC
TTCTATCCGC TCTACGAGAT CACCACTTCG CCGCTGACGG CGGGTCCCTC GAACGTGGAA
GAAGACAATC CGCTGCGCGT CGAAGGTACG CTGCTGCGCG AGCGCAACGT GGTGCTGCTC
ACCTTCTCCG GCCCCCGCAC CGACCGCGTG CTGACGATCA CCGCCTACGA CGCACAGGGA
CAGGAGCGCT GGCGCCACAC GATCCGGGCT CGGGACCTTC GTCCGCCCGA ACGGTGA
|
|---|
| Protein sequence | MRRCLLFLCG LCGLIGVAVA QVPVRLPETL PVAELLRSGP MNGYATQREV VVWLQTWAPA
QVQLLYREEG QPEDSARITP PYFAGPETDY TVHISVPYLE PGRRYVYDVV LNDTILALPY
QPRFQTQPLW QWRTDPPTFT VATASCFYVN DPPYDRPGQP YGGDFQILTH LTRLRPDVMI
WLGDNTYLRE ADFGSPTMMS YRYAHTRSHP LLQELLATAH HYAVWDDHDY GPNDADRSYV
LKGAALRIFQ QYWANPSYGL PGTPGVFTQF TWGDVDFFLL DDRFYRSPND APNDSTKTMW
GEAQLTWLID ALTYSRAPFK IVANGNQILN RSTRFESVAA RFPRDYERLL REIVRRGISG
VVFLSGDRHH TELLRYEPES FYPLYEITTS PLTAGPSNVE EDNPLRVEGT LLRERNVVLL
TFSGPRTDRV LTITAYDAQG QERWRHTIRA RDLRPPER
|
|---|
| |